RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 GABPAQ06546 454 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 MSLNQ13421 630 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 SNTB2Q13425 540 aaKnown RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 GPM6BQ13491 265 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 SLC36A3Q495N2 470 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 NADK2Q4G0N4 442 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 MPPE1Q53F39 396 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 AGKQ53H12 422 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 BOLA3Q53S33 107 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 XKR3Q5GH77 459 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 SLC25A53Q5H9E4 307 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CFAP157Q5JU67 520 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 SPATA46Q5T0L3 261 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 FAM72AQ5TYM5 149 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ARHGEF16Q5VV41 709 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 RTL6Q6ICC9 239 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 OR4C11Q6IEV9 310 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 FAM72DQ6L9T8 149 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CEACAM20Q6UY09 585 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ZNF852Q6ZMS4 543 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CYP4V2Q6ZWL3 525 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 ERASQ7Z444 233 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 TRMT11Q7Z4G4 463 aaKnown RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 FAM72BQ86X60 149 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 ELMOD1Q8N336 334 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 SLC43A2Q8N370 569 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CCDC185Q8N715 623 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ZNF383Q8NA42 475 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 GPRC5AQ8NFJ5 357 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 KBTBD8Q8NFY9 601 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 OR52M1Q8NGK5 317 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 OLIG1Q8TAK6 271 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 LNX1Q8TBB1 728 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 BRSK1Q8TDC3 778 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 PHYHIPQ92561 330 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 HIST1H2ACQ93077 130 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ZNF274Q96GC6 653 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 CFAP53Q96M91 514 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 S1PR3Q99500 378 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 GPA33Q99795 319 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CBWD1Q9BRT8 395 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 NUSAP1Q9BXS6 441 aaKnown RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 POLR1EQ9GZS1 481 aaKnown RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 TMEM117Q9H0C3 514 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 CPVLQ9H3G5 476 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ZNF665Q9H7R5 613 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 TM9SF3Q9HD45 589 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ZNF319Q9P2F9 582 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 ERVK-18Q9QC07 812 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 POLKQ9UBT6 870 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 DBF4Q9UBU7 674 aaPredicted RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 BCAP29Q9UHQ4 241 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 PILRBQ9UKJ0 227 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 PILRAQ9UKJ1 303 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 SATB2Q9UPW6 733 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 DDX49Q9Y6V7 483 aaKnown RBP2.83□□□□□ -1.96
VPS8-228ENST00000628962 UBR3Q6ZT12 1888 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
VPS8-228ENST00000628962 TIAM2Q8IVF5 1701 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 RGPD5Q99666 1765 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 A0A0U1RQV5 110 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 ATP6AP2A0A1C7CYW4 349 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 TRIM49BA6NDI0 452 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 ZSCAN5CA6NGD5 496 aaPredicted RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 SGK1O00141 431 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 MAGEB3O15480 346 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 KLHL41O60662 606 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CYTIPO60759 359 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CSO75390 466 aaKnown RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 RHOBTB1O94844 696 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CPNE6O95741 557 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CA3P07451 260 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 APRTP07741 180 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 ZCCHC18P0CG32 403 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 TOP1P11387 765 aaKnown RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 TMOD1P28289 359 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 OR1D2P34982 312 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 RFC4P35249 363 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 TIMP3P35625 211 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 HSPA14Q0VDF9 509 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CNTN1Q12860 1018 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 IL24Q13007 206 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 GPR17Q13304 367 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 GPR50Q13585 617 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 GRB14Q14449 540 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 TMEM132DQ14C87 1099 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 EXOSC7Q15024 291 aaKnown RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 SHROOM1Q2M3G4 852 aaPredicted RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 LRRC37A5PQ49AS3 106 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 ACCSLQ4AC99 568 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 PDLIM3Q53GG5 364 aaPredicted RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 LIPKQ5VXJ0 399 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 TCEAL6Q6IPX3 200 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CDC42EP5Q6NZY7 148 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CES3Q6UWW8 571 aa2.82□□□□□ -1.96
VPS8-228ENST00000628962 CCBE1Q6UXH8 406 aaPredicted RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 USP50Q70EL3 339 aaPredicted RBP2.82□□□□□ -1.96
VPS8-228ENST00000628962 ANO5Q75V66 913 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms