RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 APOBEC3BQ9UH17 382 aaKnown RBP11.28□□□□□ -0.6
TP53-227ENST00000622645 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 POM121BA6NF01 834 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 RFXAPO00287 272 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 DNTTP04053 509 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 TGM1P22735 817 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 MMP11P24347 488 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 ADPRHP54922 357 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 CLDN2P57739 230 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 CD300CQ08708 224 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 SSX1Q16384 188 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 GPAT3Q53EU6 434 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 TMEM196Q5HYL7 178 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 RD3Q7Z3Z2 195 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 CYP4Z2PQ8N1L4 340 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 KCT2Q8NC54 265 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 C9orf43Q8TAL5 461 aaPredicted RBP11.28□□□□□ -0.6
TP53-227ENST00000622645 SLC6A18Q96N87 628 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 ABCB10Q9NRK6 738 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 QPCTLQ9NXS2 382 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 TBC1D29Q9UFV1 150 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 CA5BQ9Y2D0 317 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
TP53-227ENST00000622645 A0A1W2PRQ8 180 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 EPOPA6NHQ4 379 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.6
TP53-227ENST00000622645 ASGR2P07307 311 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 AK4P27144 223 aaPredicted RBP11.27□□□□□ -0.6
TP53-227ENST00000622645 CD40LGP29965 261 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 KHKP50053 298 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 SNRPGP62308 76 aaKnown RBP11.27□□□□□ -0.6
TP53-227ENST00000622645 PPP2CBP62714 309 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 PPP2CAP67775 309 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 C12orf73Q69YU5 71 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 IQCHQ86VS3 1027 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 ATCAYQ86WG3 371 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 SLC34A3Q8N130 599 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 OR9A2Q8NGT5 310 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 RMI1Q9H9A7 625 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 ZSCAN32Q9NX65 697 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 CES1P1Q9UKY3 287 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 SLC9A8Q9Y2E8 581 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 KLK4Q9Y5K2 254 aa11.27□□□□□ -0.6
TP53-227ENST00000622645 EYSQ5T1H1 3165 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 AGAP5A6NIR3 686 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 H0Y8X5 98 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 CACNB4O00305 520 aaPredicted RBP11.27□□□□□ -0.61
TP53-227ENST00000622645 FRS3O43559 492 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 TLX2O43763 284 aaPredicted RBP11.27□□□□□ -0.61
TP53-227ENST00000622645 KIAA0513O60268 411 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 ADAM23O75077 832 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 NTN1O95631 604 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 LGI1O95970 557 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 AHRP35869 848 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 SOX3P41225 446 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 MC3RP41968 323 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 MAN2A2P49641 1150 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 SMIM11AP58511 58 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 INAVAQ3KP66 663 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 SLC48A1Q6P1K1 146 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 PLEKHG7Q6ZR37 379 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 FAM92BQ6ZTR7 304 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 SLC22A16Q86VW1 577 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 LSRQ86X29 649 aaPredicted RBP11.27□□□□□ -0.61
TP53-227ENST00000622645 KBTBD8Q8NFY9 601 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 C6orf106Q9H6K1 298 aaPredicted RBP11.27□□□□□ -0.61
TP53-227ENST00000622645 ANKHQ9HCJ1 492 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 BCL2L10Q9HD36 194 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 ENTPD4Q9Y227 616 aa11.27□□□□□ -0.61
TP53-227ENST00000622645 CCRL2O00421 344 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 BTN3A3O00478 584 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 TBX1O43435 398 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 PRKYO43930 277 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 GPX5O75715 221 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 F3P13726 295 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 BTN3A2P78410 334 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 ABATP80404 500 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 ZNF91Q05481 1191 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 SLC13A2Q13183 592 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 LTB4RQ15722 352 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 TPRG1LQ5T0D9 272 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 PAQR6Q6TCH4 344 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 TMEM64Q6YI46 380 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 OR8J1Q8NGP2 316 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 CCL4L1Q8NHW4 92 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 BBS10Q8TAM1 723 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 LCN9Q8WX39 176 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 KLHL6Q8WZ60 621 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 KAT2AQ92830 837 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 OPALINQ96PE5 141 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 PROM1O43490 865 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 FHP07954 510 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 PIPP12273 146 aaPredicted RBP11.26□□□□□ -0.61
TP53-227ENST00000622645 LAMP2P13473 410 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 CSNK2A2P19784 350 aaPredicted RBP11.26□□□□□ -0.61
TP53-227ENST00000622645 CMPK1P30085 196 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 SEPHS1P49903 392 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms