RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 EXOSC7Q15024 291 aaKnown RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 ELAVL1Q15717 326 aaKnown RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 FHL5Q5TD97 284 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 GPR155Q7Z3F1 870 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 ANKRD37Q7Z713 158 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 C10orf111Q8N326 155 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 SIMC1Q8NDZ2 872 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 MS4A4EQ96PG1 132 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 KCTD14Q9BQ13 255 aaPredicted RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 EQTNQ9NQ60 294 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 GPATCH2Q9NW75 528 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 NTMQ9P121 344 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 C19orf53Q9UNZ5 99 aaPredicted RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 PADI2Q9Y2J8 665 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 CLCA3PQ9Y6N3 262 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 DYRK3O43781 588 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 DNAJA2O60884 412 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 KLF7O75840 302 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 HMGN2P05204 90 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 IFI6P09912 130 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 RAB40ALP0C0E4 278 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 HSD17B1P14061 328 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 CD82P27701 267 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 MSX2P35548 267 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 MVDP53602 400 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 CYP51A1Q16850 503 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 SPATS1Q496A3 300 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 OR2Y1Q8NGV0 311 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 PTPMT1Q8WUK0 201 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ZNF583Q96ND8 569 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 NRSN2Q9GZP1 204 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ASCL3Q9NQ33 180 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 SLC7A8Q9UHI5 535 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 USP22Q9UPT9 525 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ERVK-19Q9WJR5 959 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 PIEZO1Q92508 2521 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 HRKO00198 91 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 BRINP1O60477 761 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ETFAP13804 333 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 GCKP35557 465 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 SOX11P35716 441 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 STAT5AP42229 794 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 FOXC1Q12948 553 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 FADDQ13158 208 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 LASP1Q14847 261 aaKnown RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 SFT2D3Q587I9 215 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 TNFAIP8L2Q6P589 184 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 IGF2-ASQ6U949 168 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 OR2T12Q8NG77 320 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ZNF578Q96N58 590 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 YIPF4Q9BSR8 244 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 C19orf25Q9UFG5 118 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 BCAP29Q9UHQ4 241 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 ZNF639Q9UID6 485 aa16.62■□□□□ 0.25
PTCHD3-202ENST00000622555 SPTBN2O15020 2390 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 NME6O75414 186 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 CIB2O75838 187 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 CBX7O95931 251 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 UMODP07911 640 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 S1PR1P21453 382 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 MATN1P21941 496 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 SSTR4P31391 388 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 GZMMP51124 257 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 RPS15P62841 145 aaKnown RBP16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 SERPINA11Q86U17 422 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 CALHM3Q86XJ0 350 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 HORMAD2Q8N7B1 307 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 OR52R1Q8NGF1 315 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 OR14A16Q8NHC5 309 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 JADE3Q92613 823 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 DAZLQ92904 295 aaKnown RBP16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 GIMAP5Q96F15 307 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 C16orf58Q96GQ5 468 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 OR8D2Q9GZM6 311 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 FAF1Q9UNN5 650 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 FARSAQ9Y285 508 aaKnown RBP16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 AK5Q9Y6K8 562 aa16.61■□□□□ 0.25
PTCHD3-202ENST00000622555 IGHV3-20A0A0C4DH32 117 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 FAM220BPB1ANY3 271 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 COQ9O75208 318 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 DLSTP36957 453 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 KHKP50053 298 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 ACTR3P61158 418 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 FUT7Q11130 342 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 DNASE1L3Q13609 305 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 GCNT6Q5T4J0 391 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 TMEM205Q6UW68 189 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 FBXO30Q8TB52 745 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 SENP5Q96HI0 755 aaPredicted RBP16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 MESP1Q9BRJ9 268 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 OR51I1Q9H343 314 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 SERHL2Q9H4I8 314 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 THSD1Q9NS62 852 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 SUCOQ9UBS9 1254 aaKnown RBP16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 TCFL5Q9UL49 500 aa16.6■□□□□ 0.25
PTCHD3-202ENST00000622555 C21orf140B9A014 251 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 BCAS2O75934 225 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms