RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 A0A1W2PQU0 124 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 K7EQS6 105 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 PROM1O43490 865 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 KIAA0513O60268 411 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 HMGN2P05204 90 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 SERPIND1P05546 499 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 HOXC4P09017 264 aaPredicted RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 HSMCR30P0CW71 290 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 IMPDH2P12268 514 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 MMP11P24347 488 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 CDK5Q00535 292 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ZNF91Q05481 1191 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 INAVAQ3KP66 663 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ITPRIPL2Q3MIP1 535 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 GDPGP1Q6ZNW5 385 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 MRGPREQ86SM8 312 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 YAF2Q8IY57 180 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 CYP4Z2PQ8N1L4 340 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 SRFBP1Q8NEF9 429 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 NR4A3Q92570 626 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ELSPBP1Q96BH3 223 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ZNF681Q96N22 645 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 CDCA3Q99618 268 aaPredicted RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 FNDC11Q9BVV2 318 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 MND1Q9BWT6 205 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 SIAEQ9HAT2 523 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 KCNK12Q9HB15 430 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 CHCHD3Q9NX63 227 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 SPHK1Q9NYA1 384 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 TRPC4Q9UBN4 977 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 KLF15Q9UIH9 416 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 HEBP2Q9Y5Z4 205 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 A0A075B6Q4 140 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 GLOD5A6NK44 160 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 H3BN98 237 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ADAM23O75077 832 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 GPX5O75715 221 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 SNX4O95219 450 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 PCYT1AP49585 367 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 DGKEP52429 567 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ADPRHP54922 357 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 DNASE1L3Q13609 305 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 FAM20CQ8IXL6 584 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 CADM3Q8N126 398 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 NANOGP1Q8N7R0 232 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 PROKR2Q8NFJ6 384 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 OR4K5Q8NGD3 323 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 KLK6Q92876 244 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 ARHGDIGQ99819 225 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 GABRG3Q99928 467 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 APOOQ9BUR5 198 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 C1QTNF7Q9BXJ2 289 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 MKRN2Q9H000 416 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 MRPS18AQ9NVS2 196 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 NDUFB11Q9NX14 153 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 OR6C2Q9NZP2 312 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 DNAJC27Q9NZQ0 273 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 NTMQ9P121 344 aa8.88□□□□□ -0.99
PDPN-212ENST00000621990 TESQ9UGI8 421 aaKnown RBP8.88□□□□□ -0.99
PDPN-212ENST00000621990 MN1Q10571 1320 aaPredicted RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 ZSCAN9O15535 394 aaPredicted RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 RNGTTO60942 597 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 CSO75390 466 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 GSTM3P21266 225 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 CMPK1P30085 196 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 GIPRP48546 466 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 PRR5P85299 388 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 KRT33BQ14525 404 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 LASP1Q14847 261 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 SPHARQ15513 63 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 SYT14P1Q58G82 188 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 STEAP3Q658P3 488 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 C18orf63Q68DL7 685 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 TMEM184AQ6ZMB5 413 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 CCDC190Q86UF4 302 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 PARP16Q8N5Y8 322 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 ZBTB8BQ8NAP8 495 aaPredicted RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 ASB12Q8WXK4 309 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 GPA33Q99795 319 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 MACROD1Q9BQ69 325 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 LMAN2LQ9H0V9 348 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 LYARQ9NX58 379 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 FBXL12Q9NXK8 326 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 QPCTLQ9NXS2 382 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 APOBEC3BQ9UH17 382 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 SNX7Q9UNH6 387 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 DIMT1Q9UNQ2 313 aaKnown RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 ENTPD4Q9Y227 616 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 LIPT1Q9Y234 373 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 EMC8O43402 210 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 PRKYO43930 277 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 KDM1AO60341 852 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 HBQ1P09105 142 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 ACADMP11310 421 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 CSNK2A2P19784 350 aaPredicted RBP8.87□□□□□ -0.99
PDPN-212ENST00000621990 CERS1P27544 350 aa8.87□□□□□ -0.99
PDPN-212ENST00000621990 S100A5P33763 92 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms