RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 NUP43Q8NFH3 380 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 OR7G2Q8NG99 324 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 OR56A1Q8NGH5 318 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 OR52N2Q8NGI0 321 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 DOK4Q8TEW6 326 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CT55Q8WUE5 264 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 DAZLQ92904 295 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 NKD1Q969G9 470 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MCUR1Q96AQ8 359 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SENP5Q96HI0 755 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MAGED4Q96JG8 741 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF583Q96ND8 569 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ECSITQ9BQ95 431 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CRB3Q9BUF7 120 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 TRIM8Q9BZR9 551 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 RAD21L1Q9H4I0 556 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 KAT8Q9H7Z6 458 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ADAP2Q9NPF8 381 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PNO1Q9NRX1 252 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ZCCHC3Q9NUD5 404 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 GPATCH2Q9NW75 528 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 C19orf25Q9UFG5 118 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CORO2BQ9UQ03 480 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 AK5Q9Y6K8 562 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CLCA3PQ9Y6N3 262 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CEP250Q9BV73 2442 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 COL27A1Q8IZC6 1860 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 LOC102723996A0A087X1L8 192 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PRORSD1PA6NEY8 169 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 CFAP73A6NFT4 308 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 A8MUA0 341 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 ANKRD65E5RJM6 399 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 NME4O00746 187 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 TERTO14746 1132 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 BRINP1O60477 761 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 SOX30O94993 753 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 CBX7O95931 251 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 BMP2P12643 396 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 HSD17B1P14061 328 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 NQO1P15559 274 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 MATN1P21941 496 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 ME2P23368 584 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 F8A1P23610 371 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 STAT5AP42229 794 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 GPR143P51810 404 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 KCNJ2P63252 427 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 TXNL4AP83876 142 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 LIPEQ05469 1076 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 FADDQ13158 208 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 DNASE1L3Q13609 305 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 TP53BP2Q13625 1128 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 CEACAM7Q14002 265 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 SFT2D3Q587I9 215 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 C6orf163Q5TEZ5 329 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 FAAH2Q6GMR7 532 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 LANCL3Q6ZV70 420 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 GPR155Q7Z3F1 870 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 CPEB2Q7Z5Q1 589 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 SERPINA11Q86U17 422 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 RNF130Q86XS8 419 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 ULK2Q8IYT8 1036 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 VWA5B2Q8N398 1253 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF615Q8N8J6 731 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 MORN4Q8NDC4 146 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 SIMC1Q8NDZ2 872 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 OR7G1Q8NGA0 311 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 OR10A6Q8NH74 314 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 OR5AK3PQ8NH89 298 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 OR14A16Q8NHC5 309 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PNPT1Q8TCS8 783 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 MIPOL1Q8TD10 442 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 NACC2Q96BF6 587 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 GIMAP5Q96F15 307 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 C16orf58Q96GQ5 468 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 CLPTM1LQ96KA5 538 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 RAB3IPQ96QF0 476 aaPredicted RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 ANKRA2Q9H9E1 313 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 THSD1Q9NS62 852 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 DDX18Q9NVP1 670 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 KCND3Q9UK17 655 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PACSIN3Q9UKS6 424 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 TCFL5Q9UL49 500 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PPIEQ9UNP9 301 aaKnown RBP7.48□□□□□ -1.21
CPNE3-209ENST00000620393 WASF3Q9UPY6 502 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PADI2Q9Y2J8 665 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 PCDHGA6Q9Y5G7 932 aa7.48□□□□□ -1.21
CPNE3-209ENST00000620393 IGHV3-20A0A0C4DH32 117 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 LOC101059948A0A1B0GTJ6 334 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 TTC36A6NLP5 189 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 DUXAA6NLW8 204 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 HRKO00198 91 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 COQ9O75208 318 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 TNFRSF21O75509 655 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PSMG1O95456 288 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 DDAH2O95865 285 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms