RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MRPS22P82650 360 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 TBX2Q13207 712 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 EFR3AQ14156 821 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 FAM120AOSQ5T036 256 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 MRM1Q6IN84 353 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 CLEC2AQ6UVW9 174 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 FAM214BQ7L5A3 538 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 PIWIL4Q7Z3Z4 852 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 LUZP2Q86TE4 346 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 P2RY8Q86VZ1 359 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CNGA4Q8IV77 575 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CPNE9Q8IYJ1 553 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 VWA5B2Q8N398 1253 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 UBL4BQ8N7F7 174 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 FAM47BQ8NA70 645 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 NUP43Q8NFH3 380 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SMAP2Q8WU79 429 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 SREK1Q8WXA9 508 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PTCD3Q96EY7 689 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PLPPR2Q96GM1 343 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 BOD1Q96IK1 185 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SERPINB12Q96P63 405 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 GPR21Q99679 349 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 OR8D2Q9GZM6 311 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CCDC68Q9H2F9 335 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 COPS7BQ9H9Q2 264 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 SAYSD1Q9NPB0 183 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 TAS2R13Q9NYV9 303 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SLC6A5Q9Y345 797 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SCN3AQ9NY46 2000 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ZCWPW2A0A1B0GU75 182 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 PRAMEF25A6NGN4 478 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CDC7O00311 574 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 VAPBO95292 243 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CD8AP01732 235 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 IFNA16P05015 189 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CD3EP07766 207 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 TPM1P09493 284 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CCDC175P0C221 793 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ZNF16P17020 682 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 GNAZP19086 355 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 DRD5P21918 477 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 GPX3P22352 226 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 IGFBP5P24593 272 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ADH6P28332 368 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ACVR1BP36896 505 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ST13P50502 369 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 RAB8AP61006 207 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SARNPP82979 210 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PGGHGQ32M88 737 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 AGAP6Q5VW22 663 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 VWA1Q6PCB0 445 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 TMIGD1Q6UXZ0 262 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 UBE3DQ7Z6J8 389 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 UBTD2Q8WUN7 234 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ALG3Q92685 438 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 KAT2AQ92830 837 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 INTS12Q96CB8 462 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 HES6Q96HZ4 224 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 HS6ST2Q96MM7 605 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 HBEGFQ99075 208 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 REXO4Q9GZR2 422 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 DDX47Q9H0S4 455 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 SYBUQ9NX95 663 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 EMC9Q9Y3B6 208 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 MAGED1Q9Y5V3 778 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 C2orf92A0A1B0GVN3 265 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 SYCE3A1L190 88 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 PABPN1LA6NDY0 278 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 ERI3O43414 337 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 BCAS2O75934 225 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PGM3O95394 542 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ACSL3O95573 720 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 TGM6O95932 706 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 GIFP27352 417 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 RPL22P35268 128 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 SLC1A2P43004 574 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PAGE2BQ5JRK9 111 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 C10orf62Q5T681 223 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PRAMEF20Q5VT98 475 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ZNF544Q6NX49 715 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ANGPTL8Q6UXH0 198 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 STAC2Q6ZMT1 411 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 PLCZ1Q86YW0 608 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 WDSUB1Q8N9V3 476 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 FAM13CQ8NE31 585 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 PIWIL2Q8TC59 973 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 DIO2Q92813 273 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 TSGA10Q9BZW7 698 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 STMN4Q9H169 189 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 OPN3Q9H1Y3 402 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 XAB2Q9HCS7 855 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 RAB6BQ9NRW1 208 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CBLN4Q9NTU7 201 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ALKBH4Q9NXW9 302 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 CUBNO60494 3623 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms