RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CCL27Q9Y4X3 112 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 DNAJC15Q9Y5T4 150 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 TRGV8A0A0C4DH27 118 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PINLYPA6NC86 204 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PIP5K1BO14986 540 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 HS6ST1O60243 411 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SEC22BO75396 215 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 P04436 131 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 STSP08842 583 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 FBXO45P0C2W1 286 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 LINC00032P0C843 101 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PCSK2P16519 638 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 GPX3P22352 226 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PRPH2P23942 346 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 ARRB2P32121 409 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SERPINB5P36952 375 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 HSF1Q00613 529 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PLGLB1Q02325 96 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 C2orf80Q0P641 193 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 MGAT2Q10469 447 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF791Q3KP31 576 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-228ENST00000618469 NOXRED1Q6NXP6 359 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 LRIG3Q6UXM1 1119 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 GK5Q6ZS86 529 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 RNF165Q6ZSG1 346 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 FAM47EQ6ZV65 393 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SAMD14Q8IZD0 417 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SLC15A4Q8N697 577 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 OR52R1Q8NGF1 315 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 OR9A2Q8NGT5 310 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 PPP1R14CQ8TAE6 165 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 FAM76AQ8TAV0 307 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 ITPAQ9BY32 194 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SSU72Q9NP77 194 aaKnown RBP14.74□□□□□ -0.05
BRCA1-228ENST00000618469 SLC35C2Q9NQQ7 365 aa14.74□□□□□ -0.05
BRCA1-228ENST00000618469 EML6Q6ZMW3 1958 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 SETD2Q9BYW2 2564 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-228ENST00000618469 WDR91A4D1P6 747 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 FAM166BA8MTA8 275 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 NPIPB8E9PQR5 432 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ACOT7O00154 380 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ASNA1O43681 348 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 CDC40O60508 579 aaKnown RBP eCLIP14.73□□□□□ -0.05
BRCA1-228ENST00000618469 SLC19A2O60779 497 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 SKAP2O75563 359 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-228ENST00000618469 LRATO95237 230 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 CBX7O95931 251 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 S1PR1P21453 382 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 DNASE1L1P49184 302 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 PER3P56645 1201 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 MAP4K2Q12851 820 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 DUSP8Q13202 625 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 GALNTL6Q49A17 601 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF628Q5EBL2 1059 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 PRAMEF20Q5VT98 475 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 FAM71E1Q6IPT2 247 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 TMEM64Q6YI46 380 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 IKBIPQ70UQ0 350 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 NUDCD3Q8IVD9 361 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 CCDC116Q8IYX3 515 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 DND1Q8IYX4 353 aaKnown RBP14.73□□□□□ -0.05
BRCA1-228ENST00000618469 FAM9CQ8IZT9 166 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 CLYBLQ8N0X4 340 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 GHDCQ8N2G8 530 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 SIMC1Q8NDZ2 872 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 OR10G3Q8NGC4 313 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 OR5M3Q8NGP4 307 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF675Q8TD23 568 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ADIPOR1Q96A54 375 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 PGM2Q96G03 612 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 METTL2AQ96IZ6 378 aaKnown RBP14.73□□□□□ -0.05
BRCA1-228ENST00000618469 BBS4Q96RK4 519 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 FAM173AQ9BQD7 235 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 TTTY12Q9BZ98 90 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 CFL2Q9Y281 166 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 TRAF6Q9Y4K3 522 aa14.73□□□□□ -0.05
BRCA1-228ENST00000618469 ITPR3Q14573 2671 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TM9SF1O15321 606 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TACR1P25103 407 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 NTSP30990 170 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 SOX18P35713 384 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 PIGAP37287 484 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TMED10P49755 219 aaKnown RBP14.72□□□□□ -0.05
BRCA1-228ENST00000618469 NRG3P56975 720 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 KIAA0040Q15053 153 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 RPS6KA2Q15349 733 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 CHI3L2Q15782 390 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TRMT12Q53H54 448 aaKnown RBP14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TNFAIP8L3Q5GJ75 292 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 Q6ZSR9 355 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 PRR22Q8IZ63 422 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 FBXW8Q8N3Y1 598 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.72□□□□□ -0.05
BRCA1-228ENST00000618469 PAQR8Q8TEZ7 354 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 KAT2AQ92830 837 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 GFM2Q969S9 779 aaKnown RBP14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TP53INP1Q96A56 240 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 CTHRC1Q96CG8 243 aa14.72□□□□□ -0.05
BRCA1-228ENST00000618469 TSSK3Q96PN8 268 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms