RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 BCHEP06276 602 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 RPS17P08708 135 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 EBLN1P0CF75 366 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 KCNJ5P48544 419 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 PRKCZQ05513 592 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 SFRP5Q5T4F7 317 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 TMEM207Q6UWW9 146 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 GPR135Q8IZ08 494 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 FCAMRQ8WWV6 532 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 RHBDF1Q96CC6 855 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 RGCCQ9H4X1 137 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 AIPO00170 330 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 FADS1O60427 444 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 B3GALT4O96024 378 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 VAMP1P23763 118 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 HTRA4P83105 476 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 TAF1AQ15573 450 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 EIF2S3LQ2VIR3 472 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 VASNQ6EMK4 673 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 GPAT4Q86UL3 456 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 NAGSQ8N159 534 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 GPR26Q8NDV2 337 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF251Q9BRH9 671 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 THSD1Q9NS62 852 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 NEDD8-MDP1E9PL57 170 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 PCDH7O60245 1069 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 SC5DO75845 299 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 UBE2IP63279 158 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 C8orf82Q6P1X6 216 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 CBLN2Q8IUK8 224 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 ATOH1Q92858 354 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 RDH14Q9HBH5 336 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 NOX3Q9HBY0 568 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 HHATLQ9HCP6 504 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 TRIM36Q9NQ86 728 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 IL20Q9NYY1 176 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 POMT2Q9UKY4 750 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 FLRT2O43155 660 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SNAPC5O75971 98 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 ZNF286BP0CG31 522 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 ACADMP11310 421 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 ELK1P19419 428 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 CTNNB1P35222 781 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 LHX1P48742 406 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 AP1S2P56377 157 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 ZNF177Q13360 481 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 KCNC3Q14003 757 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SLC36A4Q6YBV0 504 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 MBOAT1Q6ZNC8 495 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 CBLL1Q75N03 491 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 CNTN4Q8IWV2 1026 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 MARVELD1Q9BSK0 173 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 EVA1AQ9H8M9 152 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 FLVCR2Q9UPI3 526 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 EGFP01133 1207 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 PDYNP01213 254 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 PFKMP08237 780 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 ASMTP46597 345 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 STK19P49842 368 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 PRR5P85299 388 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 TRMT11Q7Z4G4 463 aaKnown RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 TMEM163Q8TC26 289 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 OR51I1Q9H343 314 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 CACNA1CQ13936 2221 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 BEST1O76090 585 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 PRH1P02810 166 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 DLX5P56178 289 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SDHAF4Q5VUM1 108 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 NOXRED1Q6NXP6 359 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 RANBP10Q6VN20 620 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 NPAS3Q8IXF0 933 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 C1orf52Q8N6N3 182 aaKnown RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SNX33Q8WV41 574 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 SDHCQ99643 169 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3B-205ENST00000616288 CPPED1Q9BRF8 314 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms