RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TMEM225Q6GV28 225 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 LCN10Q6JVE6 187 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TTC27Q6P3X3 843 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TEX38Q6PEX7 206 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRIM65Q6PJ69 517 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SASS6Q6UVJ0 657 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 FAM198BQ6UWH4 519 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 FRA10AC1Q70Z53 315 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SSX9Q7RTT3 188 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 NRARPQ7Z6K4 114 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TSPAN33Q86UF1 283 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKRD46Q86W74 232 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 AMIGO1Q86WK6 493 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 PLCZ1Q86YW0 608 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF595Q8IYB9 648 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF683Q8IZ20 524 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 FAM58AQ8N1B3 248 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 STPG4Q8N801 248 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKFN1Q8N957 763 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ICA1LQ8NDH6 482 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR4C5Q8NGB2 326 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR1J2Q8NGS2 313 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR13F1Q8NGS4 319 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR14L1PQ8NHC6 308 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDC26Q8NHZ8 85 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 KCNG3Q8TAE7 436 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF596Q8TC21 504 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 GLYATL2Q8WU03 294 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SCFD1Q8WVM8 642 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC44A1Q8WWI5 657 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 LIPHQ8WWY8 451 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 KIAA1143Q96AT1 154 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 THOC1Q96FV9 657 aaKnown RBP2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ELMO2Q96JJ3 720 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 VPS35Q96QK1 796 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ACCSQ96QU6 501 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TAAR6Q96RI8 345 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 MYADMQ96S97 322 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 DDOQ99489 341 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 LITAFQ99732 161 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 NPAS2Q99743 824 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 CPNE1Q99829 537 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SELENOSQ9BQE4 189 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 BPIFA3Q9BQP9 254 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ACBD6Q9BR61 282 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 NTMT1Q9BV86 223 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM39BQ9GZU3 492 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SIRPDQ9H106 197 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 LRMDAQ9H2I8 198 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SAV1Q9H4B6 383 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 UCK1Q9HA47 277 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SCRT2Q9NQ03 307 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 C2orf42Q9NWW7 574 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 RDH8Q9NYR8 311 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 KLHL9Q9P2J3 617 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 UXTQ9UBK9 157 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 COPS7AQ9UBW8 275 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 PACSIN2Q9UNF0 486 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ERVK-19Q9WJR5 959 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 CA5BQ9Y2D0 317 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF510Q9Y2H8 683 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 SH3GLB1Q9Y371 365 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 GRIP1Q9Y3R0 1128 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 ABCC4O15439 1325 aa2.37□□□□□ -2.03
HMGB1P24-202ENST00000615653 NINLQ9Y2I6 1382 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A0U1RQV5 110 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A1W2PPV4 95 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 C1orf226A1L170 272 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 GOLGA8IPA6NC78 632 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM221A6NGB7 291 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ASB14A6NK59 587 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM210A6NLX4 147 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 EIF4E1BA6NMX2 242 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 A8MU76 341 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDZK1P1A8MUH7 402 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SMIM1B2RUZ4 78 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 WASH3PC4AMC7 463 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 NME2P1O60361 137 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 FCMRO60667 390 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 BCAS1O75363 584 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 NME6O75414 186 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 STX11O75558 287 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 CLPXO76031 633 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDE5AO76074 875 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR5F1O95221 314 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SNAI1O95863 264 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SERPIND1P05546 499 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PATE4P0C8F1 98 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 STAG3L1P0CL83 205 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 SAGP10523 405 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 TNNI1P19237 187 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 AZGP1P25311 298 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PSMA2P25787 234 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PSMB4P28070 264 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 PPP2R1AP30153 589 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 AXLP30530 894 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 MAT2AP31153 395 aaKnown RBP2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 EVI2BP34910 448 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 ADRA1AP35348 466 aa2.36□□□□□ -2.03
HMGB1P24-202ENST00000615653 RORAP35398 523 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms