RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 MRPS22P82650 360 aaKnown RBP11.37□□□□□ -0.59
CBWD3-208ENST00000612050 PLCXD2Q0VAA5 305 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 ZNHIT3Q15649 155 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-208ENST00000612050 NTRK2Q16620 822 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 SH2D4BQ5SQS7 431 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 NOXRED1Q6NXP6 359 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 RNF165Q6ZSG1 346 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 SIAH3Q8IW03 269 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF615Q8N8J6 731 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 ADCY4Q8NFM4 1077 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 OR52R1Q8NGF1 315 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-208ENST00000612050 PPP3R2Q96LZ3 170 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 METTL7AQ9H8H3 244 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 SSU72Q9NP77 194 aaKnown RBP11.37□□□□□ -0.59
CBWD3-208ENST00000612050 KCNK9Q9NPC2 374 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 COQ3Q9NZJ6 369 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 SLC17A7Q9P2U7 560 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 TRAF6Q9Y4K3 522 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 A0A1B0GTH9 108 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 OR14I1A6ND48 311 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 BCKDKO14874 412 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZG16O60844 167 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZWINTO95229 277 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 HSPA4LO95757 839 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 FGF4P08620 206 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 CT62P0C5K7 136 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 CCL3P10147 92 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 GPX3P22352 226 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 IL12BP29460 328 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 GPC1P35052 558 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 DNASE1L1P49184 302 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 NCBP2P52298 156 aaKnown RBP eCLIP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 RPL38P63173 70 aaKnown RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 SLC10A1Q14973 349 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 GALNTL6Q49A17 601 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ATP6AP1LQ52LC2 224 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ARL13AQ5H913 290 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 PRAMEF20Q5VT98 475 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TMEM211Q6ICI0 200 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 XKRXQ6PP77 449 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 FAM111BQ6SJ93 734 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 Q6ZPB1 254 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TICAM1Q8IUC6 712 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF808Q8N4W9 903 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TWIST2Q8WVJ9 160 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 SARAFQ96BY9 339 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TMCO6Q96DC7 493 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 MECRQ9BV79 373 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 DEFB127Q9H1M4 99 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TP63Q9H3D4 680 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZFP64Q9NPA5 681 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 QPCTLQ9NXS2 382 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 HEY2Q9UBP5 337 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 MRTO4Q9UKD2 239 aaKnown RBP11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 OR10H1Q9Y4A9 318 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 DOPEY2Q9Y3R5 2298 aa11.36□□□□□ -0.59
CBWD3-208ENST00000612050 ATP6AP2A0A1C7CYW4 349 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 A0A1W2PS29 197 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ANKRD33BA6NCL7 494 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 FIGNL2A6NMB9 653 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 BIRC5O15392 142 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ATP6AP2O75787 350 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PDE9AO76083 593 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 NADKO95544 446 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-208ENST00000612050 BPGMP07738 259 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 LINC00032P0C843 101 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PCSK2P16519 638 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 DRD5P21918 477 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ABCD3P28288 659 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PTGER1P34995 402 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 HPCAL1P37235 193 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PIGAP37287 484 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PPICP45877 212 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 MAN2A2P49641 1150 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 MAD2L1Q13257 205 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-208ENST00000612050 EXOSC7Q15024 291 aaKnown RBP11.35□□□□□ -0.59
CBWD3-208ENST00000612050 TOMM20Q15388 145 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 C3AR1Q16581 482 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 CMPK2Q5EBM0 449 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 WLSQ5T9L3 541 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 LRIG3Q6UXM1 1119 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 NUP54Q7Z3B4 507 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 MMP21Q8N119 569 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 OR10G3Q8NGC4 313 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 OR9A2Q8NGT5 310 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 FAM57AQ8TBR7 257 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 AGR3Q8TD06 166 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ADIPOR1Q96A54 375 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 PPCDCQ96CD2 204 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF681Q96N22 645 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 ITPAQ9BY32 194 aa11.35□□□□□ -0.59
CBWD3-208ENST00000612050 C3orf14Q9HBI5 128 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms