RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RGS13O14921 159 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 MPZL2O60487 215 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 ADAP00813 363 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 HOXB3P14651 431 aaPredicted RBP19.29■□□□□ 0.68
SSBP3-216ENST00000610401 FUT1P19526 365 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 UQCRC2P22695 453 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 NNMTP40261 264 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 ETV6P41212 452 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 RHAGQ02094 409 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 SP3Q02447 781 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 EFR3AQ14156 821 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 PRAMEF14Q5SWL7 426 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 PRAMEF13Q5VWM6 474 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 RFPL4BQ6ZWI9 263 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 DGLUCYQ7Z3D6 616 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 LRRTM4Q86VH4 590 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 SFTPA1Q8IWL2 248 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 VWA5B2Q8N398 1253 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 DNAJC5GQ8N7S2 189 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 TRMT2BQ96GJ1 504 aaKnown RBP19.29■□□□□ 0.68
SSBP3-216ENST00000610401 SNX18Q96RF0 628 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 ZSCAN5AQ9BUG6 496 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 A0A0X1KG70 313 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 TMPRSS11DO60235 418 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 TEAD2Q15562 447 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 CEP78Q5JTW2 689 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 ANKRD53Q8N9V6 530 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 SCO1O75880 301 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 DDX5P17844 614 aaKnown RBP19.28■□□□□ 0.68
SSBP3-216ENST00000610401 DDOSTP39656 456 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 PNLIPRP1P54315 467 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 ILKQ13418 452 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 IDNKQ5T6J7 187 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 HTR3DQ70Z44 454 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 ADIPOR2Q86V24 386 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 ZNF558Q96NG5 402 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 TMEM175Q9BSA9 504 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 SPATA9Q9BWV2 254 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 MED20Q9H944 212 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 CAPN10Q9HC96 672 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 SCN5AQ14524 2016 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 RAB36O95755 333 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 HSD3B1P14060 373 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 PTPN2P17706 415 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 PTX3P26022 381 aaPredicted RBP19.28■□□□□ 0.68
SSBP3-216ENST00000610401 HSD3B2P26439 372 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 CST5P28325 142 aaPredicted RBP19.28■□□□□ 0.68
SSBP3-216ENST00000610401 EVI2BP34910 448 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 WDR5P61964 334 aaKnown RBP19.28■□□□□ 0.68
SSBP3-216ENST00000610401 CAMK2BQ13554 666 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 SLX4IPQ5VYV7 408 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 FCRLBQ6BAA4 426 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 PARS2Q7L3T8 475 aaKnown RBP19.28■□□□□ 0.68
SSBP3-216ENST00000610401 DEDD2Q8WXF8 326 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 EFCAB11Q9BUY7 163 aa19.28■□□□□ 0.68
SSBP3-216ENST00000610401 A0A0G2JMP0 313 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 SLC30A4O14863 429 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 HOXA2O43364 376 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 SRP54P61011 504 aaKnown RBP19.27■□□□□ 0.68
SSBP3-216ENST00000610401 FAM209AQ5JX71 171 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 LCN1P1Q5VSP4 162 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 SLC9B2Q86UD5 537 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 KLBQ86Z14 1044 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 TRAM1L1Q8N609 369 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 PROKR2Q8NFJ6 384 aa19.27■□□□□ 0.68
SSBP3-216ENST00000610401 ZSCAN5BA6NJL1 495 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 POLR1CO15160 346 aaPredicted RBP19.27■□□□□ 0.67
SSBP3-216ENST00000610401 RB1P06400 928 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 CTSAP10619 480 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 PEPDP12955 493 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 HMGA2P52926 109 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 STXBP1P61764 594 aaKnown RBP19.27■□□□□ 0.67
SSBP3-216ENST00000610401 KCNC3Q14003 757 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 TPGS2Q68CL5 300 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 SDE2Q6IQ49 451 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 SLC43A3Q8NBI5 491 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 OR5H6Q8NGV6 325 aa19.27■□□□□ 0.67
SSBP3-216ENST00000610401 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.67
SSBP3-216ENST00000610401 ALDH1A1P00352 501 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 MAP2K3P46734 347 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SLC9A3P48764 834 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 PRLHRP49683 370 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 GLYR1Q49A26 553 aaPredicted RBP19.26■□□□□ 0.67
SSBP3-216ENST00000610401 PIP5KL1Q5T9C9 394 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 C19orf48Q6RUI8 117 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 OR7G1Q8NGA0 311 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SMPDL3AQ92484 453 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 UPRTQ96BW1 309 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 PDXPQ96GD0 296 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 KLHL1Q9NR64 748 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 A4GNTQ9UNA3 340 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 MGAT4BQ9UQ53 548 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 GRIP1Q9Y3R0 1128 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 ANAPC1Q9H1A4 1944 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 EIF3FO00303 357 aaPredicted RBP19.26■□□□□ 0.67
SSBP3-216ENST00000610401 UQCRC1P31930 480 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SLC6A11P48066 632 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 RFX3P48380 749 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 NCBP2P52298 156 aaKnown RBP eCLIP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms