RNA–Protein interactions for RNA: ENST00000601333.1

ECH1-215, Transcript of enoyl-CoA hydratase 1, human

TSL 2

Gene ECH1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECH1-215	ENST00000601333	LSM12	Q3MHD2	195 aa	Known RBP	13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	PIGG	Q5H8A4	983 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	CGB2	Q6NT52	195 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	EPGN	Q6UW88	154 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	NPSR1	Q6W5P4	371 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	CLECL1	Q8IZS7	167 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	FAM9C	Q8IZT9	166 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	OR5M3	Q8NGP4	307 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	ZNF675	Q8TD23	568 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	OTUB1	Q96FW1	271 aa	Predicted RBP	13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	MAEL	Q96JY0	434 aa	Known RBP	13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	UTP23	Q9BRU9	249 aa	Known RBP	13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	RNF32	Q9H0A6	362 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	ACBD3	Q9H3P7	528 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	ASF1B	Q9NVP2	202 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	ASIC5	Q9NY37	505 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	NOP53	Q9NZM5	478 aa	Known RBP	13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	LRFN1	Q9P244	771 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	TEKT2	Q9UIF3	430 aa		13.63	□□□□□ -0.23
ECH1-215	ENST00000601333	SVIL	O95425	2214 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	UPK1A	O00322	258 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	TBX19	O60806	448 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	PRAMEF2	O60811	474 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	SNUPN	O95149	360 aa	Known RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	C6orf47	O95873	294 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	PRPS2	P11908	318 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	PLA2G2A	P14555	144 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	TRHR	P34981	398 aa	Predicted RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	FRK	P42685	505 aa	Predicted RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	ASMT	P46597	345 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	HLCS	P50747	726 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	SSR4	P51571	173 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	DGKQ	P52824	942 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	GYS2	P54840	703 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	CLDN8	P56748	225 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	AP2B1	P63010	937 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	BIK	Q13323	160 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	TLR1	Q15399	786 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	INPP5J	Q15735	1006 aa	Predicted RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	PGS1	Q32NB8	556 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	ZNF766	Q5HY98	468 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	RNFT1	Q5M7Z0	435 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	BICRAL	Q6AI39	1079 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	OR4F3	Q6IEY1	312 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	OGFOD2	Q6N063	350 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	GALNTL5	Q7Z4T8	443 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	LGI4	Q8N135	537 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	OR4N2	Q8NGD1	307 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	OR9I1	Q8NGQ6	314 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	OR8K3	Q8NH51	312 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	NUBPL	Q8TB37	319 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	FBXO30	Q8TB52	745 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	TM9SF4	Q92544	642 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	ELP4	Q96EB1	424 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	GIMAP4	Q9NUV9	329 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	AIG1	Q9NVV5	245 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	ANAPC2	Q9UJX6	822 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	EIF3L	Q9Y262	564 aa	Known RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	YARS2	Q9Y2Z4	477 aa	Known RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	HRH3	Q9Y5N1	445 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	GPR45	Q9Y5Y3	372 aa		13.62	□□□□□ -0.23
ECH1-215	ENST00000601333	NCKAP5	O14513	1909 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	C2orf92	A0A1B0GVN3	265 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	EDF1	O60869	148 aa	Known RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	SLC25A12	O75746	678 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	CCL3	P10147	92 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	MAPK1	P28482	360 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	NTS	P30990	170 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	MPI	P34949	423 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	HPCAL1	P37235	193 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	ZFP36L2	P47974	494 aa	Known RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	CYB561	P49447	251 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	AQP5	P55064	265 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	FBXW4	P57775	412 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	ZNF791	Q3KP31	576 aa	Predicted RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	SPANXN4	Q5MJ08	99 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	RGS9BP	Q6ZS82	235 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	SLC29A4	Q7RTT9	530 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	ANKRD46	Q86W74	232 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	CYP4Z2P	Q8N1L4	340 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	TMEM156	Q8N614	296 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	OR10G3	Q8NGC4	313 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	ASB15	Q8WXK1	588 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	COQ8B	Q96D53	544 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	SCMH1	Q96GD3	660 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	C16orf58	Q96GQ5	468 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	ART5	Q96L15	291 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	CXorf36	Q9H7Y0	433 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	FOLH1B	Q9HBA9	442 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	EQTN	Q9NQ60	294 aa		13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	WBP11	Q9Y2W2	641 aa	Known RBP	13.61	□□□□□ -0.23
ECH1-215	ENST00000601333	NIN	Q8N4C6	2090 aa		13.6	□□□□□ -0.23
ECH1-215	ENST00000601333	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.6	□□□□□ -0.23
ECH1-215	ENST00000601333	TRAV17	A0A0B4J275	112 aa		13.6	□□□□□ -0.23
ECH1-215	ENST00000601333	TRPC5OS	A6NMA1	111 aa		13.6	□□□□□ -0.23
ECH1-215	ENST00000601333	C17orf51	A8MQB3	221 aa		13.6	□□□□□ -0.23
ECH1-215	ENST00000601333		E9PBE3	544 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms