RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 LRRC46Q96FV0 321 aa16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 HBEGFQ99075 208 aa16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 ANGPTL4Q9BY76 406 aa16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 NXF5Q9H1B4 397 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 ZBTB26Q9HCK0 441 aa16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 MED12Q93074 2177 aa16.09■□□□□ 0.17
SHKBP1-223ENST00000600552 A0A1B0GTL3 188 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 ANKRD33BA6NCL7 494 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 PPP6CO00743 305 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 CTAG2O75638 210 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 EPPINO95925 133 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 PDYNP01213 254 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 GPX3P22352 226 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 CNTFP26441 200 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 ABCD3P28288 659 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 TAOK1Q7L7X3 1001 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 COMMD6Q7Z4G1 85 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 VWA5B2Q8N398 1253 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 METTL4Q8N3J2 472 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 SIMC1Q8NDZ2 872 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 OR7G1Q8NGA0 311 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 OR1J4Q8NGS1 313 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 GOT1L1Q8NHS2 421 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 SLC44A1Q8WWI5 657 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 KLHL29Q96CT2 875 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 PAFAH2Q99487 392 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 NTMT1Q9BV86 223 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 ITPAQ9BY32 194 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 UGT2B28Q9BY64 529 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 CLEC4MQ9H2X3 399 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 CDC42EP4Q9H3Q1 356 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 KLRF1Q9NZS2 232 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 TMCO1Q9UM00 188 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 MAPRE3Q9UPY8 281 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 C15orf41Q9Y2V0 281 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 PCDHA9Q9Y5H5 950 aa16.08■□□□□ 0.16
SHKBP1-223ENST00000600552 KIAA1549Q9HCM3 1950 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 GOLGA6L10A6NI86 522 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 TRIM49D1C9J1S8 452 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 EEF1E1-BLOC1S5C9J1V9 151 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 STX16-NPEPL1H3BU86 382 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 SYT5O00445 386 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 STX16O14662 325 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 EEF1E1O43324 174 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 GUCY1B2O75343 617 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 HPNP05981 417 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 ABCB1P08183 1280 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 BMP7P18075 431 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 TCEA1P23193 301 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 ASCL1P50553 236 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 SRYQ05066 204 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 LTB4RQ15722 352 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 CEBPEQ15744 281 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 DCST1Q5T197 706 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 FNDC7Q5VTL7 733 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 METTL2BQ6P1Q9 378 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 LACC1Q8IV20 430 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 TRPC4APQ8TEL6 797 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 ZNF592Q92610 1267 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 ABTB1Q969K4 478 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 OMA1Q96E52 524 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 HSPBAP1Q96EW2 488 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 GALNT9Q9HCQ5 603 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 ADAM29Q9UKF5 820 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 PLEKHA6Q9Y2H5 1048 aa16.07■□□□□ 0.16
SHKBP1-223ENST00000600552 C1orf226A1L170 272 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 NME6O75414 186 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 PPM1BO75688 479 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 KRT38O76015 456 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 OR4F21O95013 312 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 CSNK2A2P19784 350 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 S1PR1P21453 382 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 SERPINB9P50453 376 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 PLCXD2Q0VAA5 305 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 TSNAXIP1Q2TAA8 658 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 TCHHL1Q5QJ38 904 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 TIGD3Q6B0B8 471 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 VASNQ6EMK4 673 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 SLC48A1Q6P1K1 146 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 LETMD1Q6P1Q0 360 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 ZNF572Q7Z3I7 529 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 PM20D2Q8IYS1 436 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 C1orf52Q8N6N3 182 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 FAM83FQ8NEG4 500 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 OR52R1Q8NGF1 315 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 RNASE6Q93091 150 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 TM4SF18Q96CE8 201 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 NODALQ96S42 347 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 MRPL57Q9BQC6 102 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 SERHLQ9NQF3 203 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 MAT2BQ9NZL9 334 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 PSME2Q9UL46 239 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 SNX6Q9UNH7 406 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 ZNF780BQ9Y6R6 833 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 EXPH5Q8NEV8 1989 aa16.06■□□□□ 0.16
SHKBP1-223ENST00000600552 ITPR3Q14573 2671 aa16.05■□□□□ 0.16
SHKBP1-223ENST00000600552 OTCP00480 354 aa16.05■□□□□ 0.16
SHKBP1-223ENST00000600552 CD99P14209 185 aa16.05■□□□□ 0.16
SHKBP1-223ENST00000600552 PCSK2P16519 638 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms