RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 EMDP50402 254 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SOX8P57073 446 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 RAPSNQ13702 412 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 MAPKAPK3Q16644 382 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 GTDC1Q4AE62 458 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 B3GNTL1Q67FW5 361 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 FCRLBQ6BAA4 426 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 DNAJC14Q6Y2X3 702 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 C16orf47Q6ZP98 133 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 RETREG3Q86VR2 466 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SNX32Q86XE0 403 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 GALNT16Q8N428 558 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SIRT6Q8N6T7 355 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 OR5AK3PQ8NH89 298 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 GOT1L1Q8NHS2 421 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 C16orf52Q8NHV5 167 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 APOBEC4Q8WW27 367 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 GTF2H4Q92759 462 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 ERP27Q96DN0 273 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 NPAS2Q99743 824 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 LIN28AQ9H9Z2 209 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 NEUROD4Q9HD90 331 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC6A13Q9NSD5 602 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 MRGBPQ9NV56 204 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 DDX18Q9NVP1 670 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 NTMQ9P121 344 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 PTGFRNQ9P2B2 879 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 CFAP47Q6ZTR5 3102 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 TMEM200CA6NKL6 621 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 FBP2O00757 339 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 EMC8O43402 210 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 MAN1A2O60476 641 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 ZFAND5O76080 213 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 RNF4P78317 190 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 CBX1P83916 185 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 EBPQ15125 230 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 COL28A1Q2UY09 1125 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 H3F3CQ6NXT2 135 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 TMEM64Q6YI46 380 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 HSDL2Q6YN16 418 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 POU5F2Q8N7G0 328 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 NUP43Q8NFH3 380 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 FDCSPQ8NFU4 85 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 THAP3Q8WTV1 239 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 TSPEARQ8WU66 669 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 EXTL1Q92935 676 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 ITCHQ96J02 903 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 PANX1Q96RD7 426 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 DEFB126Q9BYW3 111 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 LHPPQ9H008 270 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 RMND5AQ9H871 391 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 ZCCHC3Q9NUD5 404 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 PCDHGB4Q9UN71 923 aa18.57■□□□□ 0.56
SHKBP1-222ENST00000600320 ZFHX4Q86UP3 3567 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 LOC100653049A0A140TA62 436 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 DYTNA2CJ06 578 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 A8MUI8 341 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 CAPN14A8MX76 684 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 RFXANKO14593 260 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 PRAMEF2O60811 474 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 CEACAM4O75871 244 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 BCAS2O75934 225 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 DCTN3O75935 186 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 KRT34O76011 436 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 HOXB9P17482 250 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 PTPN6P29350 595 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 CCT3P49368 545 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 PRKAG1P54619 331 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 C6orf10Q5SRN2 563 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 JMJD6Q6NYC1 403 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 BORAQ6PGQ7 559 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 GPR155Q7Z3F1 870 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 SZRD1Q7Z422 152 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 WDR53Q7Z5U6 358 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 GIMAP5Q96F15 307 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 ITPAQ9BY32 194 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 PAIP1Q9H074 479 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 FOLH1BQ9HBA9 442 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 C3orf14Q9HBI5 128 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 GPR83Q9NYM4 423 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 SLAMF8Q9P0V8 285 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 LEF1Q9UJU2 399 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 NDUFAF1Q9Y375 327 aa18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 HEMK1Q9Y5R4 338 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-222ENST00000600320 RNF103-CHMP3A0A140T963 221 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 OR6C76A6NM76 312 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 COQ9O75208 318 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 LRRC74AQ0VAA2 488 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 MYBPC3Q14896 1274 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 MAPRE2Q15555 327 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 SPDYE7PQ495Y7 208 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 TCTN3Q6NUS6 607 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 ZNF621Q6ZSS3 439 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 ZNF441Q8N8Z8 693 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 OR8K3Q8NH51 312 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 NUBPLQ8TB37 319 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 SFXN5Q8TD22 340 aa18.55■□□□□ 0.56
SHKBP1-222ENST00000600320 ADIPOR1Q96A54 375 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms