RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MMP25Q9NPA2 562 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ERVK-19Q9WJR5 959 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 DOCK10Q96BY6 2186 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 ESPL1Q14674 2120 aa17.53■□□□□ 0.4
CCDC9-205ENST00000600117 HIVEP3Q5T1R4 2406 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 FAM234BA2RU67 622 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 KIR3DL1P43629 444 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 FUT7Q11130 342 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 DUSP8Q13202 625 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 MLC1Q15049 377 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 TRMT12Q53H54 448 aaKnown RBP17.52■□□□□ 0.4
CCDC9-205ENST00000600117 FHL5Q5TD97 284 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 VWA5B2Q8N398 1253 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 KIF2BQ8N4N8 673 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 CLEC1AQ8NC01 280 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 OR1N1Q8NGS0 311 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 KAT2AQ92830 837 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 ZBTB18Q99592 522 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 CNPPD1Q9BV87 410 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 OR8D2Q9GZM6 311 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 SAR1AQ9NR31 198 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 TMEM45AQ9NWC5 275 aa17.52■□□□□ 0.4
CCDC9-205ENST00000600117 A0A1W2PRB8 838 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 DNAJB5O75953 348 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 FAM107AO95990 144 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 PGRP06401 933 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 IFI6P09912 130 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 ITGAMP11215 1152 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 ICAM2P13598 275 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 SSTR4P31391 388 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 S100A3P33764 101 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 CDK9P50750 372 aaKnown RBP17.51■□□□□ 0.39
CCDC9-205ENST00000600117 POLR2JP52435 117 aaKnown RBP17.51■□□□□ 0.39
CCDC9-205ENST00000600117 MANFP55145 182 aaKnown RBP17.51■□□□□ 0.39
CCDC9-205ENST00000600117 MRPS35P82673 323 aaKnown RBP17.51■□□□□ 0.39
CCDC9-205ENST00000600117 HSPB3Q12988 150 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 KBTBD2Q8IY47 623 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 SIMC1Q8NDZ2 872 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 OR7G2Q8NG99 324 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 ZFP28Q8NHY6 868 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 OR5P2Q8WZ92 322 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 PSMF1Q92530 271 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 VMP1Q96GC9 406 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 ART5Q96L15 291 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 SLC52A3Q9NQ40 469 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 SIRT3Q9NTG7 399 aaPredicted RBP17.51■□□□□ 0.39
CCDC9-205ENST00000600117 ERVK-11Q9UQG0 969 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 POLQO75417 2590 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 C2CD3Q4AC94 2353 aa17.51■□□□□ 0.39
CCDC9-205ENST00000600117 CSMD1Q96PZ7 3565 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 PLOD2O00469 737 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 RNASET2O00584 256 aaKnown RBP17.5■□□□□ 0.39
CCDC9-205ENST00000600117 DYRK3O43781 588 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 CEACAM4O75871 244 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 AGFG2O95081 481 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 C6orf47O95873 294 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 CBX7O95931 251 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 MC3RP41968 323 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 SLC37A1P57057 533 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 RCAN2Q14206 197 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 AGKQ53H12 422 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 BLOC1S3Q6QNY0 202 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 CLECL1Q8IZS7 167 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 GALNT16Q8N428 558 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 ZNF615Q8N8J6 731 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 PSMA8Q8TAA3 256 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 THOC3Q96J01 351 aaKnown RBP17.5■□□□□ 0.39
CCDC9-205ENST00000600117 NMUR2Q9GZQ4 415 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 FAM120CQ9NX05 1096 aaKnown RBP17.5■□□□□ 0.39
CCDC9-205ENST00000600117 CCDC167Q9P0B6 97 aa17.5■□□□□ 0.39
CCDC9-205ENST00000600117 A0A087WV62 115 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 TRBV11-1A0A0K0K1C0 115 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 PRSS51A0A1B0GVH4 220 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 PRKNO60260 465 aaPredicted RBP17.49■□□□□ 0.39
CCDC9-205ENST00000600117 PLOD3O60568 738 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 SLITRK5O94991 958 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 IL6P05231 212 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ITGA3P26006 1051 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 CCL11P51671 97 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 CLCN2P51788 898 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 EXOSC7Q15024 291 aaKnown RBP17.49■□□□□ 0.39
CCDC9-205ENST00000600117 TIGD2Q4W5G0 525 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 C6orf163Q5TEZ5 329 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ANXA8L1Q5VT79 327 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 TMEM107Q6UX40 140 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ANKRD46Q86W74 232 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 OR7G1Q8NGA0 311 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ELP4Q96EB1 424 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 OR52E6Q96RD3 313 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 LHPPQ9H008 270 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 ANKRA2Q9H9E1 313 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 COPS7AQ9UBW8 275 aa17.49■□□□□ 0.39
CCDC9-205ENST00000600117 NUP214P35658 2090 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-205ENST00000600117 TMEM200CA6NKL6 621 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 FCHO1O14526 889 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 CAPN3P20807 821 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 MLLT10P55197 1068 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 AP2B1P63010 937 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms