RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PAQR8Q8TEZ7 354 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 SSC4DQ8WTU2 575 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 ERP27Q96DN0 273 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 KCNK9Q9NPC2 374 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 SACM1LQ9NTJ5 587 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 BCAP29Q9UHQ4 241 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 TMED5Q9Y3A6 229 aa19.44■□□□□ 0.7
PNKP-209ENST00000596726 MYO7BQ6PIF6 2116 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 A0A0G2JMM0 328 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 A0A1W2PPB8 328 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 A0A1W2PRS3 328 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 KIR3DP1A8MWS1 328 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 ITM2AO43736 263 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 LDLRP01130 860 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 SERPINE1P05121 402 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 SDC1P18827 310 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 MPIP34949 423 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 RFC3P40938 356 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 EMDP50402 254 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 MRPS35P82673 323 aaKnown RBP19.43■□□□□ 0.7
PNKP-209ENST00000596726 CHI3L2Q15782 390 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 SLC22A10Q63ZE4 541 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 BNC2Q6ZN30 1099 aaPredicted RBP19.43■□□□□ 0.7
PNKP-209ENST00000596726 OR52R1Q8NGF1 315 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 OR9A2Q8NGT5 310 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 PSMG3-AS1Q96PY0 264 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 CCT7Q99832 543 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 FAM173AQ9BQD7 235 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 STMN4Q9H169 189 aaPredicted RBP19.43■□□□□ 0.7
PNKP-209ENST00000596726 MIEF1Q9NQG6 463 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 NPFFR2Q9Y5X5 522 aa19.43■□□□□ 0.7
PNKP-209ENST00000596726 HECTD1Q9ULT8 2610 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 TMEM114B3SHH9 223 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 LYPLA1O75608 230 aaPredicted RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 BCAS2O75934 225 aaPredicted RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 P04436 131 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ABCE1P61221 599 aaKnown RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 RPL38P63173 70 aaKnown RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 RBPJQ06330 500 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.42■□□□□ 0.7
PNKP-209ENST00000596726 CHERPQ8IWX8 916 aaKnown RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 OR10G3Q8NGC4 313 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 PPP1R14CQ8TAE6 165 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 KAT2AQ92830 837 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 RELTQ969Z4 430 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ZNF764Q96H86 408 aaPredicted RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 C3orf30Q96M34 536 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 BBS4Q96RK4 519 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ITPAQ9BY32 194 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 C20orf27Q9GZN8 174 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 NXF5Q9H1B4 397 aaKnown RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 ZNF395Q9H8N7 513 aaPredicted RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 PROK2Q9HC23 129 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 TMBIM4Q9HC24 238 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 PRODH2Q9UF12 536 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ZNF835Q9Y2P0 537 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 CHCHD2Q9Y6H1 151 aaPredicted RBP19.42■□□□□ 0.7
PNKP-209ENST00000596726 ICE1Q9Y2F5 2266 aa19.42■□□□□ 0.7
PNKP-209ENST00000596726 ZNF407Q9C0G0 2248 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 SETXQ7Z333 2677 aaKnown RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 CAPN14A8MX76 684 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 G3V3Y1 287 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 TFECO14948 347 aaPredicted RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 HS6ST1O60243 411 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 PLOD3O60568 738 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 TBX19O60806 448 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 GLSO94925 669 aaPredicted RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 HSPA4LO95757 839 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 FOXO1Q12778 655 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 GALNTL6Q49A17 601 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 CMPK2Q5EBM0 449 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 TMEM64Q6YI46 380 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 Q6ZPB1 254 aaPredicted RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 GK5Q6ZS86 529 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 FAM9CQ8IZT9 166 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 GHDCQ8N2G8 530 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 FBXW8Q8N3Y1 598 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 TLCD1Q96CP7 247 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 LCORQ96JN0 433 aaPredicted RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 PPP3R2Q96LZ3 170 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 ANKRA2Q9H9E1 313 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 CNIH4Q9P003 139 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 CNOT11Q9UKZ1 510 aaKnown RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 DNAJC13O75165 2243 aa19.41■□□□□ 0.7
PNKP-209ENST00000596726 UTP20O75691 2785 aaKnown RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 SPTAN1Q13813 2472 aaKnown RBP19.41■□□□□ 0.7
PNKP-209ENST00000596726 DOPEY1Q5JWR5 2465 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 A0A1B0GUH1 482 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 LRRTM2O43300 516 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 DRD5P21918 477 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 GRK2P25098 689 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 PIGAP37287 484 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 PPICP45877 212 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 DNASE1L1P49184 302 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 SLC18A1P54219 525 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 NRG3P56975 720 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 WDR4P57081 412 aaKnown RBP19.4■□□□□ 0.7
PNKP-209ENST00000596726 DCAF7P61962 342 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 CASP8Q14790 479 aa19.4■□□□□ 0.7
PNKP-209ENST00000596726 HYAL4Q2M3T9 481 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 378.1 ms