RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 NEFHP12036 1026 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 PCSK2P16519 638 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 SDC1P18827 310 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 EMDP50402 254 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 HSF1Q00613 529 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 C2orf80Q0P641 193 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 RFTN2Q52LD8 501 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 FGD2Q7Z6J4 655 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 TICAM1Q8IUC6 712 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC15A4Q8N697 577 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM98AQ8NCA5 519 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 OR2M7Q8NG81 312 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 OR9A2Q8NGT5 310 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 CDC26Q8NHZ8 85 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC22A8Q8TCC7 542 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 KAT2AQ92830 837 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 SGCZQ96LD1 299 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 C3orf30Q96M34 536 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 PSMG3-AS1Q96PY0 264 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 CCT7Q99832 543 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 ITPAQ9BY32 194 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 C20orf27Q9GZN8 174 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 NXF5Q9H1B4 397 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 PROK2Q9HC23 129 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 EML4Q9HC35 981 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 TAS2R7Q9NYW3 318 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 NPIPA1Q9UND3 350 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 CHCHD2Q9Y6H1 151 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF780BQ9Y6R6 833 aa10.13□□□□□ -0.79
SHKBP1-206ENST00000595523 MYO1GB0I1T2 1018 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 BIRC5O15392 142 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 LRRTM2O43300 516 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ASNA1O43681 348 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 HS6ST1O60243 411 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ERLIN1O75477 346 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 GLSO94925 669 aaPredicted RBP10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ZWINTO95229 277 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 CHEK2O96017 543 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 SERPINE1P05121 402 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 WDR4P57081 412 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 RPL38P63173 70 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 FOXO1Q12778 655 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 CHI3L2Q15782 390 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 NNATQ16517 81 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 NTRK2Q16620 822 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 GALNTL6Q49A17 601 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 C4orf17Q53FE4 359 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF385BQ569K4 471 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 CMPK2Q5EBM0 449 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 C6orf163Q5TEZ5 329 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 C1QL3Q5VWW1 255 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 IKBIPQ70UQ0 350 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 CROCCP2Q86T23 111 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 DDIASQ8IXT1 998 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 PRR22Q8IZ63 422 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 POGLUT1Q8NBL1 392 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 C17orf47Q8NEP4 570 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 OR7G2Q8NG99 324 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 OR10G3Q8NGC4 313 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 OR52R1Q8NGF1 315 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 OR52N2Q8NGI0 321 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 PAQR8Q8TEZ7 354 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 SSC4DQ8WTU2 575 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 TLCD1Q96CP7 247 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 SORT1Q99523 831 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 SACM1LQ9NTJ5 587 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 BCAP29Q9UHQ4 241 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 CNOT11Q9UKZ1 510 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 SLC5A6Q9Y289 635 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF835Q9Y2P0 537 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ADGRG4Q8IZF6 3080 aa10.12□□□□□ -0.79
SHKBP1-206ENST00000595523 ATP6AP2A0A1C7CYW4 349 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 TMEM114B3SHH9 223 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 SKAP2O75563 359 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ATP6AP2O75787 350 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 LRATO95237 230 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 MYZAPP0CAP1 466 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 BCKDHAP12694 445 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 CNR1P21554 472 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 BGNP21810 368 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ABCD3P28288 659 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 PIGAP37287 484 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 DNASE1L1P49184 302 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 FBXW4P57775 412 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 CASP8Q14790 479 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 KRTCAP3Q53RY4 240 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 PRAMEF20Q5VT98 475 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ANKRD26P1Q6NSI1 321 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 SAMD14Q8IZD0 417 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 FAM9CQ8IZT9 166 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF781Q8N8C0 355 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 OR5M3Q8NGP4 307 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 CLHC1Q8NHS4 586 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 GFM2Q969S9 779 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ERP27Q96DN0 273 aa10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 ZNF764Q96H86 408 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-206ENST00000595523 VSTM2LQ96N03 204 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms