RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 KCNJ2P63252 427 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 TMEM211Q6ICI0 200 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 GPRIN3Q6ZVF9 776 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 TMEM200AQ86VY9 491 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 SLC22A9Q8IVM8 553 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 GSPT2Q8IYD1 628 aaKnown RBP12.13□□□□□ -0.47
H3F3B-213ENST00000593254 TAGAPQ8N103 731 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 C1orf52Q8N6N3 182 aaKnown RBP12.13□□□□□ -0.47
H3F3B-213ENST00000593254 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
H3F3B-213ENST00000593254 LRRN4CLQ8ND94 238 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 C17orf47Q8NEP4 570 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 OR7G1Q8NGA0 311 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 NINJ1Q92982 152 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 TM4SF18Q96CE8 201 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 L3HYPDHQ96EM0 354 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 OR10A5Q9H207 317 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 ZNF703Q9H7S9 590 aaPredicted RBP12.13□□□□□ -0.47
H3F3B-213ENST00000593254 KCNN3Q9UGI6 736 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 CNOT11Q9UKZ1 510 aaKnown RBP12.13□□□□□ -0.47
H3F3B-213ENST00000593254 STAB1Q9NY15 2570 aa12.13□□□□□ -0.47
H3F3B-213ENST00000593254 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ANKRD33BA6NCL7 494 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 AQP7O14520 342 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 BCKDKO14874 412 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 TOXO94900 526 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ATP1B1P05026 303 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 NT5EP21589 574 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
H3F3B-213ENST00000593254 MGAT2Q10469 447 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
H3F3B-213ENST00000593254 LCP2Q13094 533 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 RPS6KA2Q15349 733 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 PRICKLE4Q2TBC4 344 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 GXYLT1Q4G148 440 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 LRRC25Q8N386 305 aaPredicted RBP12.12□□□□□ -0.47
H3F3B-213ENST00000593254 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 RPRMLQ8N4K4 120 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ADIPOR1Q96A54 375 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ZNF559Q9BR84 538 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 ZFP64Q9NPA5 681 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 CCM2LQ9NUG4 571 aaPredicted RBP12.12□□□□□ -0.47
H3F3B-213ENST00000593254 MAT2BQ9NZL9 334 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 TBK1Q9UHD2 729 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 MCM8Q9UJA3 840 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
H3F3B-213ENST00000593254 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
H3F3B-213ENST00000593254 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 HCN1O60741 890 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ULK1O75385 1050 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ERAL1O75616 437 aaKnown RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ESRRBO95718 433 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ENO1P06733 434 aaKnown RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 RFPL3SP0C7P2 107 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 FOSL1P15407 271 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 CHN1P15882 459 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 CSNK2A2P19784 350 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 GPX3P22352 226 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 HMOX2P30519 316 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 SOX18P35713 384 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 FEN1P39748 380 aaKnown RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 MAN2A2P49641 1150 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 TMED10P49755 219 aaKnown RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 HTR6P50406 440 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 PKNOX1P55347 436 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 DUSP2Q05923 314 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 MAP4K2Q12851 820 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 FOXD4Q12950 439 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 TBCELQ5QJ74 424 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 TMEM64Q6YI46 380 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 SH2D5Q6ZV89 423 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 OR5M3Q8NGP4 307 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ASB5Q8WWX0 329 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 RND1Q92730 232 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 KLHL29Q96CT2 875 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 CNRIP1Q96F85 164 aaPredicted RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ZNF681Q96N22 645 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 SECISBP2Q96T21 854 aaKnown RBP12.11□□□□□ -0.47
H3F3B-213ENST00000593254 DOHHQ9BU89 302 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 FAIM2Q9BWQ8 316 aa12.11□□□□□ -0.47
H3F3B-213ENST00000593254 ACPTQ9BZG2 426 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms