RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 YIPF7Q8N8F6 280 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 SAMD12Q8N8I0 201 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 PLPP7Q8NBV4 271 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 PLA2G15Q8NCC3 412 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 FBXO15Q8NCQ5 510 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR9Q2Q8NGE9 314 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 OR5AK3PQ8NH89 298 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 GOT1L1Q8NHS2 421 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 TMEM203Q969S6 136 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 ERLEC1Q96DZ1 483 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 BARD1Q99728 777 aaKnown RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 LGR4Q9BXB1 951 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 GSDMCQ9BYG8 508 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 COMMD4Q9H0A8 199 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 DMRT3Q9NQL9 472 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 PHPT1Q9NRX4 125 aaPredicted RBP3.36□□□□□ -1.87
VMP1-216ENST00000592790 CACNG4Q9UBN1 327 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 B4GALT6Q9UBX8 382 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 IL36AQ9UHA7 158 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
VMP1-216ENST00000592790 TRBV5-3A0A0A0MS03 114 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TEX13CA0A0J9YWL9 993 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C1orf226A1L170 272 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TRAPPC13A5PLN9 417 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 KIAA0355O15063 1070 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NDUFS4O43181 175 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 EMC8O43402 210 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR1F1O43749 312 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CREBL2O60519 120 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 DNTTP04053 509 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC10A3P09131 477 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZDHHC11BP0C7U3 371 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ARSAP15289 507 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PRKACBP22694 351 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ACVR2AP27037 513 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CCND3P30281 292 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 BMP8BP34820 402 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MNDAP41218 407 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GZMKP49863 264 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TBPL1P62380 186 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TMEM115Q12893 351 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 SGCGQ13326 291 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SNTB2Q13425 540 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 AAK1Q2M2I8 961 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C18orf21Q32NC0 220 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 FNDC3BQ53EP0 1204 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 HENMT1Q5T8I9 393 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 HBMQ6B0K9 141 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 EIF5AL1Q6IS14 154 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 RTL4Q6ZR62 310 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 BMP8AQ7Z5Y6 402 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RDH10Q8IZV5 341 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CELF2-AS1Q8N7Q2 184 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FAM98AQ8NCA5 519 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR6F1Q8NGZ6 308 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR56B4Q8NH76 319 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TNFAIP8L1Q8WVP5 186 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FCAMRQ8WWV6 532 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ADAMTS14Q8WXS8 1223 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SUSD6Q92537 303 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC22A18Q96BI1 424 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NUS1Q96E22 293 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NEURL3Q96EH8 262 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PKMYT1Q99640 499 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 DHRS9Q9BPW9 319 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PDCD10Q9BUL8 212 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RIOK2Q9BVS4 552 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 KLF16Q9BXK1 252 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 CACNG6Q9BXT2 260 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SAP130Q9H0E3 1048 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR51J1Q9H342 316 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR51I1Q9H343 314 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MTG2Q9H4K7 406 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TCF7L1Q9HCS4 588 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RANGRFQ9HD47 186 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC52A3Q9NQ40 469 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ELOVL2Q9NXB9 296 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MALT1Q9UDY8 824 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ACSL5Q9ULC5 683 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MGAT4AQ9UM21 535 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PPT2Q9UMR5 302 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SCN1AP35498 2009 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 A0A0G2JMZ2 1700 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 LRRC37A2A6NM11 1700 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZSWIM8A7E2V4 1837 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PTPRFP10586 1907 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MIA3Q5JRA6 1907 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 A8MV72 311 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 E7EQ34 232 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GFYI3L273 518 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SGK494L7N484 410 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SCO2O43819 266 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CSO75390 466 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 HIST1H2ABP04908 130 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 HPGDP15428 266 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ARSBP15848 533 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ENDOUP21128 410 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 IL32P24001 234 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GIPRP48546 466 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms