RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 C17orf105B2RV13 164 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 CYR61O00622 381 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 KLHL2O95198 593 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 WISP3O95389 354 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 GLI4P10075 376 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 DNASE1P24855 282 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 PPP2R1BP30154 601 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SERPINB1P30740 379 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 TLX1P31314 330 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 HNRNPH1P31943 449 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 MDH1P40925 334 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 MAGEA12P43365 314 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 KIR2DL3P43628 341 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SLC6A12P48065 614 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 GABPB1Q06547 395 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 TSNQ15631 228 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 HSPB2Q16082 182 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 MPEG1Q2M385 716 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ADPRMQ3LIE5 342 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 TTMPQ5BVD1 217 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 XKR6Q5GH73 641 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 C1orf185Q5T7R7 199 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 RIPPLY2Q5TAB7 128 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SLC22A10Q63ZE4 541 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SULT1C3Q6IMI6 304 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ABHD17CQ6PCB6 329 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ARSKQ6UWY0 536 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 GPSM1Q86YR5 675 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 FBXW8Q8N3Y1 598 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 LIX1Q8N485 282 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SLC15A4Q8N697 577 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM251Q8N6I4 163 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ANKS4BQ8N8V4 417 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 BANPQ8N9N5 519 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SNX31Q8N9S9 440 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 GOT1L1Q8NHS2 421 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 STAG3L4Q8TBR4 150 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 LRRC8CQ8TDW0 803 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 PTPMT1Q8WUK0 201 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ARL8AQ96BM9 186 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 RHBDF1Q96CC6 855 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 RMND5BQ96G75 393 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 RBM18Q96H35 190 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 QRFPRQ96P65 431 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 DGAT2Q96PD7 388 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 TRMOQ9BU70 441 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 POLDIP3Q9BY77 421 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 MRPL46Q9H2W6 279 aaKnown RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 CCDC134Q9H6E4 229 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 DEPPQ9NTK1 212 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 QPCTLQ9NXS2 382 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 ADAM21Q9UKJ8 722 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 PLLPQ9Y342 182 aa8.71□□□□□ -1.02
BRCA1-226ENST00000591534 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-226ENST00000591534 PCNX1Q96RV3 2341 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 ATP6AP2A0A1C7CYW4 349 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM200CA6NKL6 621 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 DVL2O14641 736 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 KLF11O14901 512 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 PHGDHO43175 533 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TYROBPO43914 113 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 SMIM24O75264 130 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 STK16O75716 305 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 ATP6AP2O75787 350 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 ALDOAP04075 364 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 C2P06681 752 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 NCF1P14598 390 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 CERS1P27544 350 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 GCAP28676 217 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 SERPINB3P29508 390 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 GGT5P36269 586 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 GDF5P43026 501 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 MAGEA5P43359 124 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 IST1P53990 364 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 KCNJ2P63252 427 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 IRF8Q02556 426 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TGFBIQ15582 683 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 PDK4Q16654 411 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF750Q32MQ0 723 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 FBXO48Q5FWF7 155 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 PIGGQ5H8A4 983 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 FDX2Q6P4F2 183 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 WDR53Q7Z5U6 358 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 NUBPLQ8TB37 319 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 SLC2A12Q8TD20 617 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TANKQ92844 425 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 SCYL1Q96KG9 808 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 MAGEB18Q96M61 343 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 PELOQ9BRX2 385 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 DERL2Q9GZP9 239 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 LIN28AQ9H9Z2 209 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 EML4Q9HC35 981 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 ZFP64Q9NPA5 681 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 CNIH4Q9P003 139 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms