RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 POC1B-GALNT4F8VUJ3 575 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 SYT5O00445 386 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 ERAL1O75616 437 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 URI1O94763 535 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 IL2RAP01589 272 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 HPNP05981 417 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 GPX3P22352 226 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 ABCD3P28288 659 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 DNAJA1P31689 397 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 SLC48A1Q6P1K1 146 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 SEM1Q6ZVN7 128 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 LACC1Q8IV20 430 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 SELENOMQ8WWX9 145 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 IFT81Q8WYA0 676 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 NRGNQ92686 78 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 HSPBAP1Q96EW2 488 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 MRPL46Q9H2W6 279 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 UBQLN3Q9H347 655 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 METTL7AQ9H8H3 244 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 CAMK2AQ9UQM7 478 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 NF1P21359 2839 aa16.42■□□□□ 0.22
PRKCSH-211ENST00000590098 CTAG2O75638 210 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 PPM1BO75688 479 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 PDYNP01213 254 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 ABCB1P08183 1280 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 RPS17P08708 135 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 NAGAP17050 411 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 CSNK2A2P19784 350 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 S1PR1P21453 382 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 TIMP3P35625 211 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 FEN1P39748 380 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 ASCL1P50553 236 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 MAP4K2Q12851 820 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 SNTB1Q13884 538 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 NNATQ16517 81 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 PRICKLE4Q2TBC4 344 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 FAM111BQ6SJ93 734 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 TNIP2Q8NFZ5 429 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 OR1J4Q8NGS1 313 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 TMEM41AQ96HV5 264 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 FMO2Q99518 471 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 FAIM2Q9BWQ8 316 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 POLDIP3Q9BY77 421 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 PRDM14Q9GZV8 571 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 NXF5Q9H1B4 397 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 BRF2Q9HAW0 419 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 FARSBQ9NSD9 589 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 ZNF629Q9UEG4 869 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 CES1P1Q9UKY3 287 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 SLC6A5Q9Y345 797 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 ZNF780BQ9Y6R6 833 aa16.41■□□□□ 0.22
PRKCSH-211ENST00000590098 HRNRQ86YZ3 2850 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 TRIM49D1C9J1S8 452 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 GNB5O14775 395 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 ATP1B1P05026 303 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 TSPAN8P19075 237 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 CEACAM8P31997 349 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 ALDH9A1P49189 494 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 CDH13P55290 713 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 WNT3P56703 355 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 EXOSC7Q15024 291 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 FNDC7Q5VTL7 733 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 TIGD3Q6B0B8 471 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 VASNQ6EMK4 673 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 LETMD1Q6P1Q0 360 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 RPS27LQ71UM5 84 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 NUP54Q7Z3B4 507 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 RELL2Q8NC24 303 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 RNASE6Q93091 150 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 TM4SF18Q96CE8 201 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 LCORQ96JN0 433 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 ZNF180Q9UJW8 692 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 DTX4Q9Y2E6 619 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 MPDZO75970 2070 aa16.4■□□□□ 0.22
PRKCSH-211ENST00000590098 ACOX3O15254 700 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 BMP7P18075 431 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 GCKP35557 465 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 IST1P53990 364 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 MGAT2Q10469 447 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 GALNT1Q10472 559 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 EIPR1Q53HC9 387 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 WIPI1Q5MNZ9 446 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 TEX35Q5T0J7 233 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 NSUN5P2Q63ZY6 315 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 SLC30A6Q6NXT4 461 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 ANGPTL8Q6UXH0 198 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 MMGT1Q8N4V1 131 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 NAXEQ8NCW5 288 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 ADCY4Q8NFM4 1077 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 UHMK1Q8TAS1 419 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 DCAKDQ8WVC6 231 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 ABTB1Q969K4 478 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 OMA1Q96E52 524 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 TRIB1Q96RU8 372 aa16.39■□□□□ 0.21
PRKCSH-211ENST00000590098 GPATCH1Q9BRR8 931 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms