RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 PRIM2P49643 509 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 NOVA1P51513 510 aaKnown RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 NCBP2P52298 156 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 NME5P56597 212 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DCAF7P61962 342 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 RPS15P62841 145 aaKnown RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 RUNX2Q13950 521 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 KCNAB1Q14722 419 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 UGT8Q16880 541 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ZSWIM7Q19AV6 140 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DEFB110Q30KQ9 67 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 CCDC157Q569K6 752 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 HES3Q5TGS1 186 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ADNP2Q6IQ32 1131 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 PWWP2BQ6NUJ5 590 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 C6orf15Q6UXA7 325 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ZNF793Q6ZN11 406 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ZNF621Q6ZSS3 439 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ASRGL1Q7L266 308 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 SCUBE1Q8IWY4 988 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DEFB107AQ8IZN7 70 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 FBXW8Q8N3Y1 598 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 KRTCAP2Q8N6L1 136 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 BMPERQ8N8U9 685 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 RBM15BQ8NDT2 890 aaKnown RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 PLPP5Q8NEB5 264 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DEFB124Q8NES8 71 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 BHLHE22Q8NFJ8 381 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 OR7A2PQ8NGA2 310 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 OR14A16Q8NHC5 309 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 CLHC1Q8NHS4 586 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DNAJB14Q8TBM8 379 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ZNF675Q8TD23 568 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 RASSF5Q8WWW0 418 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 JADE3Q92613 823 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 KIAA1143Q96AT1 154 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-210ENST00000590061 MIEF2Q96C03 454 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 EGLN2Q96KS0 407 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 MARK4Q96L34 752 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 PPM1MQ96MI6 270 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 RNF145Q96MT1 663 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 AMDHD1Q96NU7 426 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ANKRD27Q96NW4 1050 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 DGAT2Q96PD7 388 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 NRTNQ99748 197 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 EVA1AQ9H8M9 152 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 POLR1BQ9H9Y6 1135 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 EXD2Q9NVH0 621 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 GIN1Q9NXP7 522 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 ADA2Q9NZK5 511 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 TMEM9Q9P0T7 183 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 NTMQ9P121 344 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 COPS7AQ9UBW8 275 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 GIMAP2Q9UG22 337 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 LIPT1Q9Y234 373 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 CLCA3PQ9Y6N3 262 aa6.87□□□□□ -1.31
SMAD4-210ENST00000590061 SCN3AQ9NY46 2000 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 MYO15AQ9UKN7 3530 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 ERICH4A6NGS2 130 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 OR6C76A6NM76 312 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 STMND1H3BQB6 276 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 CLIC1O00299 241 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 GSTA4O15217 222 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 BRINP1O60477 761 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 PRAMEF10O60809 474 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 PRAMEF2O60811 474 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 GBAP04062 536 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 HEXBP07686 556 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 GUSBP08236 651 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 HSD17B1P14061 328 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 TNNI3P19429 210 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 CAPN3P20807 821 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 LCN1P31025 176 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 STT3AP46977 705 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 ID4P47928 161 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 CCT3P49368 545 aaKnown RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 DGKQP52824 942 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 HNRNPH2P55795 449 aaKnown RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 IGLV3-21P80748 117 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 MRPS22P82650 360 aaKnown RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 SHC2P98077 582 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 MAP4K2Q12851 820 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 VEZF1Q14119 521 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 C16orf72Q14CZ0 275 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 ELAVL1Q15717 326 aaKnown RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 ZNF630Q2M218 657 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-210ENST00000590061 PRAMEF8Q5VWM4 474 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 PRAMEF7Q5VXH5 474 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 CPZQ66K79 652 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 OR4F3Q6IEY1 312 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 DHRS13Q6UX07 377 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 GK5Q6ZS86 529 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 ERMP1Q7Z2K6 904 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 KRT73Q86Y46 540 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 EID3Q8N140 333 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 RNF175Q8N4F7 328 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
SMAD4-210ENST00000590061 C11orf65Q8NCR3 313 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms