RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PRODH2Q9UF12 536 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 VPS4AQ9UN37 437 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 C19orf53Q9UNZ5 99 aaPredicted RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 NDUFAF1Q9Y375 327 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 RNF103-CHMP3A0A140T963 221 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 LOC100653049A0A140TA62 436 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 A6NL46 340 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 BBIP1A8MTZ0 92 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 UPK1AO00322 258 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 KRT34O76011 436 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 CELA2AP08217 269 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 ITGAMP11215 1152 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 UQCRC2P22695 453 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 SOX18P35713 384 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
VMP1-210ENST00000589823 CCL11P51671 97 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 RNF4P78317 190 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 STX5Q13190 355 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 FHL5Q5TD97 284 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 BORAQ6PGQ7 559 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 BHLHB9Q6PI77 547 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 ZNF621Q6ZSS3 439 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 KIF2BQ8N4N8 673 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 SLC5A8Q8N695 610 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 ZNF615Q8N8J6 731 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 OR56A1Q8NGH5 318 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 OR5AK3PQ8NH89 298 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 DNAJB8Q8NHS0 232 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 GOT1L1Q8NHS2 421 aaPredicted RBP12.66□□□□□ -0.38
VMP1-210ENST00000589823 GTF2H4Q92759 462 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 CMTM5Q96DZ9 223 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 FAM120BQ96EK7 910 aaKnown RBP12.66□□□□□ -0.38
VMP1-210ENST00000589823 INPP5KQ9BT40 448 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
VMP1-210ENST00000589823 ASPDHA6ND91 283 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 A8MUI8 341 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 KCNH1O95259 989 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 CLPSP04118 112 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 GSNP06396 782 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 ZCCHC18P0CG32 403 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 COX4I1P13073 169 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 CD1EP15812 388 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 PRDX6P30041 224 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 SOX8P57073 446 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 EBPQ15125 230 aaKnown RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 TLR1Q15399 786 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 PAGE3Q5JUK9 113 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 C9orf40Q8IXQ3 194 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 AMER2Q8N7J2 671 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 SIMC1Q8NDZ2 872 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 BRIX1Q8TDN6 353 aaKnown RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 SLC35A5Q9BS91 424 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 EQTNQ9NQ60 294 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 SERHLQ9NQF3 203 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 NTMQ9P121 344 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
VMP1-210ENST00000589823 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
VMP1-210ENST00000589823 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 A0A096LPI6 279 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 C2orf92A0A1B0GVN3 265 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 MRASO14807 208 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 ERN1O75460 977 aaKnown RBP12.64□□□□□ -0.39
VMP1-210ENST00000589823 DNAJB5O75953 348 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 CDKN2CP42773 168 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 PRIM2P49643 509 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 EMDP50402 254 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 DCAF7P61962 342 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 DUSP8Q13202 625 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 NFYCQ13952 458 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 TBR1Q16650 682 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 COQ5Q5HYK3 327 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 FAM91A1Q658Y4 838 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 SIRT6Q8N6T7 355 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 PCYOX1LQ8NBM8 494 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
VMP1-210ENST00000589823 THAP3Q8WTV1 239 aaPredicted RBP12.64□□□□□ -0.39
VMP1-210ENST00000589823 ZNF354BQ96LW1 612 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms