RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MMP25Q9NPA2 562 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 ZCCHC3Q9NUD5 404 aaKnown RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.13□□□□□ -0.15
ATG4D-211ENST00000589753 NTMQ9P121 344 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 MAP10Q9P2G4 905 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 POLHQ9Y253 713 aa14.13□□□□□ -0.15
ATG4D-211ENST00000589753 A0A087WV48 116 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 RNF103-CHMP3A0A140T963 221 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 MASP2O00187 686 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 AIM2O14862 343 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 COQ9O75208 318 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 CBX6O95503 412 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 ZCCHC18P0CG32 403 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 PTPN6P29350 595 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 CLCN2P51788 898 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 PRKAG1P54619 331 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 RRADP55042 308 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 UCNP55089 124 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 SLC37A1P57057 533 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 DUSP8Q13202 625 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 GAB1Q13480 694 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 GTDC1Q4AE62 458 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 BHLHB9Q6PI77 547 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 CLEC4FQ8N1N0 589 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 ZNF615Q8N8J6 731 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 TMEM102Q8N9M5 508 aaPredicted RBP14.12□□□□□ -0.15
ATG4D-211ENST00000589753 NUP43Q8NFH3 380 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 NSL1Q96IY1 281 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 EFCAB1Q9HAE3 211 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 IL1RL2Q9HB29 575 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 ATP13A2Q9NQ11 1180 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 SLC6A13Q9NSD5 602 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 SLAMF8Q9P0V8 285 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 CFL2Q9Y281 166 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 PCDHB14Q9Y5E9 798 aa14.12□□□□□ -0.15
ATG4D-211ENST00000589753 TRBV11-1A0A0K0K1C0 115 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 ARGFXA6NJG6 315 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 OR6C76A6NM76 312 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 PSMG1O95456 288 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 NPPAP01160 153 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 CELA2AP08217 269 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 ESRRAP11474 423 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 HOXB9P17482 250 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 ITPKBP27987 946 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 CHI3L1P36222 383 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 CPA2P48052 419 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 TMPRSS3P57727 454 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 AP2B1P63010 937 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 GABPB1Q06547 395 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 Q0VFX4 171 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 AIMP2Q13155 320 aaKnown RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 TRMT5Q32P41 509 aaKnown RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 DLEU7Q6UYE1 221 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 HSDL2Q6YN16 418 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 KBTBD2Q8IY47 623 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 KIF2BQ8N4N8 673 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 KDF1Q8NAX2 398 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 CLEC1AQ8NC01 280 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 C16orf52Q8NHV5 167 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 ELP5Q8TE02 316 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 MS4A4EQ96PG1 132 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 GID8Q9NWU2 228 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 SLC25A37Q9NYZ2 338 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 VAPAQ9P0L0 249 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 PRODH2Q9UF12 536 aa14.11□□□□□ -0.15
ATG4D-211ENST00000589753 ZNF223Q9UK11 482 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-211ENST00000589753 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 TRBV5-3A0A0A0MS03 114 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 K7ENP7 123 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 UBOX5O94941 541 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 HMGN2P05204 90 aaKnown RBP14.1□□□□□ -0.15
ATG4D-211ENST00000589753 SERPINA7P05543 415 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 CALB2P22676 271 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 EMDP50402 254 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 NUDT2P50583 147 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 MNAT1P51948 309 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 RNF4P78317 190 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 FOXK2Q01167 660 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 ART3Q13508 389 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 DEFB109BQ30KR1 87 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 SAXO2Q658L1 398 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 INO80CQ6PI98 192 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-211ENST00000589753 C6orf89Q6UWU4 347 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 ANGPTL8Q6UXH0 198 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 SLC29A4Q7RTT9 530 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 C6orf120Q7Z4R8 191 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 MSRB3Q8IXL7 192 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 OR8K3Q8NH51 312 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 ZFP90Q8TF47 636 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 ROPN1LQ96C74 230 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 LRRC58Q96CX6 371 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 NEURL3Q96EH8 262 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 GIMAP5Q96F15 307 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 CGREF1Q99674 301 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 DEFB126Q9BYW3 111 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 EPS8L2Q9H6S3 715 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 TPT1P8Q9HAU6 139 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms