RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GPX3P22352 226 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 EPHA3P29320 983 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 HPCAL1P37235 193 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 EMDP50402 254 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 OGFOD2Q6N063 350 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 LYPD8Q6UX82 237 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 MDGA2Q7Z553 956 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 R3HCC1LQ7Z5L2 792 aaKnown RBP18.68■□□□□ 0.58
DDX39A-207ENST00000588542 CYP4Z2PQ8N1L4 340 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 HORMAD2Q8N7B1 307 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 OR7G2Q8NG99 324 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 ASB15Q8WXK1 588 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 ERP27Q96DN0 273 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 MAELQ96JY0 434 aaKnown RBP18.68■□□□□ 0.58
DDX39A-207ENST00000588542 KLHL1Q9NR64 748 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 HELZ2Q9BYK8 2649 aaKnown RBP18.68■□□□□ 0.58
DDX39A-207ENST00000588542 GOLGA8QA0A0J9YX86 632 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 GOLGA8OA6NCC3 632 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 GOLGA8NF8WBI6 632 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 ATP8B1O43520 1251 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 SLC25A12O75746 678 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 ALDOCP09972 364 aaKnown RBP18.67■□□□□ 0.58
DDX39A-207ENST00000588542 CD46P15529 392 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 CLDN8P56748 225 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 C21orf58P58505 322 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 SLC9B1Q4ZJI4 515 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 SLC25A25Q6KCM7 469 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 IL20RBQ6UXL0 311 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 ZNF551Q7Z340 670 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-207ENST00000588542 GPALPP1Q8IXQ4 340 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 SLC15A4Q8N697 577 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 TP53INP1Q96A56 240 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 MIB2Q96AX9 1013 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 MAGEB18Q96M61 343 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 TAAR6Q96RI8 345 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 BARD1Q99728 777 aaKnown RBP18.67■□□□□ 0.58
DDX39A-207ENST00000588542 ASF1BQ9NVP2 202 aa18.67■□□□□ 0.58
DDX39A-207ENST00000588542 COPG1Q9Y678 874 aaKnown RBP18.67■□□□□ 0.58
DDX39A-207ENST00000588542 A0A087WV62 115 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 A8MVJ9 347 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 PLOD2O00469 737 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 ANKRD28O15084 1053 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 NME2P1O60361 137 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 NME6O75414 186 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 BCAS2O75934 225 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 SLITRK5O94991 958 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 LAMP1P11279 417 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 PRPS1L1P21108 318 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 NME2P22392 152 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 RPL3P39023 403 aaKnown RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 MC3RP41968 323 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 NR0B1P51843 470 aaKnown RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 IGFBP7Q16270 282 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 INAQ16352 499 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 ZNF791Q3KP31 576 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 OPN5Q6U736 354 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 TMEM107Q6UX40 140 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 RGS9BPQ6ZS82 235 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 GALNTL5Q7Z4T8 443 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 C17orf47Q8NEP4 570 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 SLC22A8Q8TCC7 542 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 COQ8BQ96D53 544 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 ELP4Q96EB1 424 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 C5orf34Q96MH7 638 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 ITPAQ9BY32 194 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 NXF5Q9H1B4 397 aaKnown RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 ACSS1Q9NUB1 689 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-207ENST00000588542 HPF1Q9NWY4 346 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 MAP10Q9P2G4 905 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 CFL2Q9Y281 166 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 USH1CQ9Y6N9 552 aa18.66■□□□□ 0.58
DDX39A-207ENST00000588542 UBR5O95071 2799 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-207ENST00000588542 TENM4Q6N022 2769 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 FASNP49327 2511 aaKnown RBP18.65■□□□□ 0.58
DDX39A-207ENST00000588542 PYCARD-AS1I3L0S3 204 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 IFI6P09912 130 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 EFNA1P20827 205 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-207ENST00000588542 FOXK1P85037 733 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 HSPB3Q12988 150 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 MAPKAPK3Q16644 382 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 HLA-DQA1Q5Y7H0 255 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 SPATA19Q7Z5L4 167 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 TMEM178AQ8NBL3 297 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 ACTRT2Q8TDY3 377 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 GRHL3Q8TE85 626 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 TMEM125Q96AQ2 219 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 ZBED6CLQ96FA7 236 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-207ENST00000588542 OR52B2Q96RD2 323 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 MED4Q9NPJ6 270 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 PRODH2Q9UF12 536 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 C19orf53Q9UNZ5 99 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-207ENST00000588542 ERVK-11Q9UQG0 969 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 RELNP78509 3460 aa18.65■□□□□ 0.58
DDX39A-207ENST00000588542 SVILO95425 2214 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 UPK1AO00322 258 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 RASAL1O95294 804 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 PSMG1O95456 288 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 FBXO45P0C2W1 286 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 CDK9P50750 372 aaKnown RBP18.64■□□□□ 0.57
DDX39A-207ENST00000588542 MANFP55145 182 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms