RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LTB4RQ15722 352 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 PRICKLE4Q2TBC4 344 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 UNC50Q53HI1 259 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 RIPPLY2Q5TAB7 128 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CLYBLQ8N0X4 340 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 MYRIPQ8NFW9 859 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 KLHL29Q96CT2 875 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TIMP4Q99727 224 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 C1QTNF3Q9BXJ4 246 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 ITPAQ9BY32 194 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 MAT2BQ9NZL9 334 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TMEM216Q9P0N5 145 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 TRPS1Q9UHF7 1281 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 SNX6Q9UNH7 406 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 C15orf41Q9Y2V0 281 aa13.13□□□□□ -0.31
VMP1-206ENST00000587945 F8P00451 2351 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 MANBAO00462 879 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 GNB5O14775 395 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 DLX3O60479 287 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 GUCY1B2O75343 617 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 SUPT7LO94864 414 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 SNX4O95219 450 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 CBX7O95931 251 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 KRT15P19012 456 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 TMED10P49755 219 aaKnown RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 CRYZQ08257 329 aaKnown RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 MAP4K2Q12851 820 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 TOMM20Q15388 145 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 TNIP2Q8NFZ5 429 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 NRGNQ92686 78 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 CNRIP1Q96F85 164 aaPredicted RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 TMEM237Q96Q45 408 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 SECISBP2Q96T21 854 aaKnown RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 UBQLN3Q9H347 655 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 BRF2Q9HAW0 419 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
VMP1-206ENST00000587945 HEY2Q9UBP5 337 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 VPS29Q9UBQ0 182 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 ZNF639Q9UID6 485 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
VMP1-206ENST00000587945 FAM47E-STBD1D6RA91 191 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 NME6O75414 186 aaPredicted RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 PPM1BO75688 479 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 ESRRBO95718 433 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 ATP1B1P05026 303 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 HPNP05981 417 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 PCSK2P16519 638 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 TAC1P20366 129 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 HTR6P50406 440 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 RPP38P78345 283 aaKnown RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 MRPS35P82673 323 aaKnown RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 WIPI1Q5MNZ9 446 aaPredicted RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 ZNF678Q5SXM1 525 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 DCST1Q5T197 706 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 CES4AQ5XG92 561 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 TIFABQ6ZNK6 161 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 RELL2Q8NC24 303 aaPredicted RBP13.11□□□□□ -0.31
VMP1-206ENST00000587945 C17orf47Q8NEP4 570 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 OR52R1Q8NGF1 315 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 HGDQ93099 445 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 OMA1Q96E52 524 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 ZNF681Q96N22 645 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 NODALQ96S42 347 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 ANKRA2Q9H9E1 313 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 GALNT9Q9HCQ5 603 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 PFDN4Q9NQP4 134 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 PSME2Q9UL46 239 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 PLLPQ9Y342 182 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 PCDHGB3Q9Y5G1 929 aa13.11□□□□□ -0.31
VMP1-206ENST00000587945 HSPB2A8KAH6 182 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 AHRRA9YTQ3 701 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 GOLGA8RI6L899 631 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 UGT2B11O75310 529 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 ZWINTO95229 277 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 EPPINO95925 133 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 KRT6AP02538 564 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms