RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 OR4K1Q8NGD4 311 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CHTF18Q8WVB6 975 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TMEM125Q96AQ2 219 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 VPS33AQ96AX1 596 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 MTFMTQ96DP5 389 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 C11orf24Q96F05 449 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 APIPQ96GX9 242 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CCDC120Q96HB5 630 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TEX37Q96LM6 180 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 LURAP1Q96LR2 239 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CCDC115Q96NT0 180 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CGREF1Q99674 301 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 ECSITQ9BQ95 431 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SARGQ9BW04 601 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 BHLHE41Q9C0J9 482 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 RAD21L1Q9H4I0 556 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SYNPO2LQ9H987 977 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 MRPS30Q9NP92 439 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 MYNNQ9NPC7 610 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CUTCQ9NTM9 273 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TMEM184CQ9NVA4 438 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 PTGFRNQ9P2B2 879 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 C15orf41Q9Y2V0 281 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 NUP210LQ5VU65 1888 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TACC2O95359 2948 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 PKDREJQ9NTG1 2253 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 LOC105369274A0A096LPK9 316 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 LOC102723532A0A0G2JNH3 316 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 TCRBV3S1A0A5B6 114 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 ASPDHA6ND91 283 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 FAM220BPB1ANY3 271 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 RNASET2O00584 256 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 RFXANKO14593 260 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 CASQ2O14958 399 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 PEX1O43933 1283 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 CTSVO60911 334 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 BAG2O95816 211 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 ZNF10P21506 573 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 IL10P22301 178 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 IL12AP29459 219 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 SLC7A1P30825 629 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 HSPA13P48723 471 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 EFNA3P52797 238 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 PER3P56645 1201 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 VSX2P58304 361 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 RPS15AP62244 130 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 TRA2BP62995 288 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 RELAQ04206 551 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 LIPEQ05469 1076 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 EEF1A2Q05639 463 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 KLC1Q07866 573 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 HEPACAMQ14CZ8 416 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 RBBP5Q15291 538 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 VWA2Q5GFL6 755 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 PAGE3Q5JUK9 113 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 CATSPEREQ5SY80 951 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 CPTPQ5TA50 214 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 KHDRBS2Q5VWX1 349 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 ZNF324BQ6AW86 544 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 FRMPD2BQ6IN97 320 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 NANOGP8Q6NSW7 305 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 TLDC1Q6P9B6 456 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 SLC2A7Q6PXP3 512 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 ISLR2Q6UXK2 745 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 GFRALQ6UXV0 394 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 COMMD6Q7Z4G1 85 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 OR4N4Q8N0Y3 316 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 PQLC1Q8N2U9 271 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 C1orf52Q8N6N3 182 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 OR52E4Q8NGH9 312 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 BRIX1Q8TDN6 353 aaKnown RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 GTF2H4Q92759 462 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 RGMAQ96B86 450 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 TSSK3Q96PN8 268 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 C17orf62Q9BQA9 187 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 CRB3Q9BUF7 120 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 MS4A8Q9BY19 250 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 LHPPQ9H008 270 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 REEP4Q9H6H4 257 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 EPS8L2Q9H6S3 715 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 NANOGQ9H9S0 305 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 IL1RL2Q9HB29 575 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 MIEF1Q9NQG6 463 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 ZNF282Q9UDV7 671 aaPredicted RBP7.33□□□□□ -1.24
VMP1-204ENST00000587259 BTNL2Q9UIR0 455 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 PCDHGB4Q9UN71 923 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 DLGAP4Q9Y2H0 992 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 GMEB1Q9Y692 573 aa7.33□□□□□ -1.24
VMP1-204ENST00000587259 A0A0J9YVX5 310 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 PRSS51A0A1B0GVH4 220 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 A0A1W2PPV9 198 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 DHRS12A0PJE2 317 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 URADA6NGE7 173 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 CCL21O00585 134 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 PCDH17O14917 1159 aa7.32□□□□□ -1.24
VMP1-204ENST00000587259 DSCR3O14972 297 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms