RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MRTO4Q9UKD2 239 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 NXT1Q9UKK6 140 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 PADI2Q9Y2J8 665 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 MRPS2Q9Y399 296 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 FAM32AQ9Y421 112 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 DTNAQ9Y4J8 743 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 MAU2Q9Y6X3 613 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 LY6G6EA0A0G2JKS1 128 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PLOD2O00469 737 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CYR61O00622 381 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 NTN3O00634 580 aaPredicted RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 ADAMDEC1O15204 470 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 FOXS1O43638 330 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 TIPRLO75663 272 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 KCNK5O95279 499 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 IFNW1P05000 195 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ALPPP05187 535 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 HEXBP07686 556 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CYC1P08574 325 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 BMP2P12643 396 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CDH2P19022 906 aaPredicted RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 AQP1P29972 269 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CCKBRP32239 447 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 KDELR2P33947 212 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 GALNSP34059 522 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 STT3AP46977 705 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PGDP52209 483 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PSMD4P55036 377 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 PSPHP78330 225 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 DCDP81605 110 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 MAT1AQ00266 395 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 ID2Q02363 134 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 EPS8Q12929 822 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SF3A2Q15428 464 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 MPEG1Q2M385 716 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 IFI44LQ53G44 452 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 EIPR1Q53HC9 387 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 DCAF12Q5T6F0 453 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 C1orf189Q5VU69 101 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PRAMEF8Q5VWM4 474 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PRAMEF7Q5VXH5 474 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CDC73Q6P1J9 531 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 BRICD5Q6PL45 260 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 RNF111Q6ZNA4 994 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 EIF3MQ7L2H7 374 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 GPR155Q7Z3F1 870 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ARHGAP22Q7Z5H3 698 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ARMC8Q8IUR7 673 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ZDHHC21Q8IVQ6 265 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 OR4N5Q8IXE1 308 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PEX5LQ8IYB4 626 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 TAGAPQ8N103 731 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CLEC4FQ8N1N0 589 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 OR2L13Q8N349 312 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SVOPLQ8N434 492 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 HORMAD2Q8N7B1 307 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ADCY4Q8NFM4 1077 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 OR14A16Q8NHC5 309 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SPPL2AQ8TCT8 520 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 MIPOL1Q8TD10 442 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 XAGE5Q8WWM1 108 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 GEMIN6Q8WXD5 167 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 NR4A3Q92570 626 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 KAT2AQ92830 837 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 DAZLQ92904 295 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 TMEM19Q96HH6 336 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PYURFQ96I23 114 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 HSH2DQ96JZ2 352 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PTCHD1Q96NR3 888 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ZNF347Q96SE7 839 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 STACQ99469 402 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ZNF184Q99676 751 aaPredicted RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 ALOXE3Q9BYJ1 711 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ULBP3Q9BZM4 244 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 REEP1Q9H902 201 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SYNPO2LQ9H987 977 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SLAMF7Q9NQ25 335 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ENAMQ9NRM1 1142 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SIRT3Q9NTG7 399 aaPredicted RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 DCAF13Q9NV06 445 aaKnown RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 IFT80Q9P2H3 777 aaPredicted RBP5.8□□□□□ -1.48
LIG3-206ENST00000586058 PDP2Q9P2J9 529 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CES1P1Q9UKY3 287 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 SLC9A8Q9Y2E8 581 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 OR10H1Q9Y4A9 318 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 NEUROG3Q9Y4Z2 214 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 PCDHGA1Q9Y5H4 931 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 CLCA3PQ9Y6N3 262 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 U3KQA8 63 aa5.8□□□□□ -1.48
LIG3-206ENST00000586058 ZNF318Q5VUA4 2279 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SDK1Q7Z5N4 2213 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 A0A0G2JPF8 293 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 TCRBV5S2A0A599 114 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 WASHC1A8K0Z3 465 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 C17orf105B2RV13 164 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 HNRNPCL2B2RXH8 293 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 HNRNPCL3B7ZW38 293 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 HMGN4O00479 90 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PCDH17O14917 1159 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CASQ2O14958 399 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms