RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OR51Q1Q8NH59 317 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 ZNF675Q8TD23 568 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 UCN3Q969E3 161 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 NAF1Q96HR8 494 aaKnown RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 RSRC1Q96IZ7 334 aaKnown RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 CLPTM1LQ96KA5 538 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 SPSB2Q99619 263 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 SLC39A3Q9BRY0 314 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 SLC35A5Q9BS91 424 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 FAM117AQ9C073 453 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 SLC26A1Q9H2B4 701 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 NTMQ9P121 344 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 HCN3Q9P1Z3 774 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 IL17BQ9UHF5 180 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 FBXW2Q9UKT8 454 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 MRPS18BQ9Y676 258 aaKnown RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 DUXAA6NLW8 204 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 FAM227AF5H4B4 570 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CYR61O00622 381 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 PCDH17O14917 1159 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 ARPC2O15144 300 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 GSTA4O15217 222 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 C1QL1O75973 258 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 PSMG1O95456 288 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 ALBP02768 609 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CD63P08962 238 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 RAB40ALP0C0E4 278 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 LIFP15018 202 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CD1EP15812 388 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 PORP16435 677 aaPredicted RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 GGT1P19440 569 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 TCN2P20062 427 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 AGXTP21549 392 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 GPC1P35052 558 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 DLSTP36957 453 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 NCBP2P52298 156 aaKnown RBP eCLIP11.83□□□□□ -0.529e-8■□□□□ 10.2
VMP1-202ENST00000585847 POLE2P56282 527 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 RPS18P62269 152 aaKnown RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 MC1RQ01726 317 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 NCF4Q15080 339 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 VMACQ2NL98 169 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 ZNF385BQ569K4 471 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 ARHGAP40Q5TG30 622 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 SAXO2Q658L1 398 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 DNAJC14Q6Y2X3 702 aaPredicted RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 VASH2Q86V25 355 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 TMEM52Q8NDY8 209 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 BHLHE22Q8NFJ8 381 aaPredicted RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 MIPOL1Q8TD10 442 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 EXOSC8Q96B26 276 aaKnown RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 MIEF2Q96C03 454 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 PEX11GQ96HA9 241 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 NSMCE2Q96MF7 247 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 ZNF583Q96ND8 569 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CSF3RQ99062 836 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 MAPKAP1Q9BPZ7 522 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 INPP5KQ9BT40 448 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 UGT2B28Q9BY64 529 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 C8orf4Q9NR00 106 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 LANCL2Q9NS86 450 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 C14orf105Q9NVL8 296 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 SLAMF8Q9P0V8 285 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 IFT80Q9P2H3 777 aaPredicted RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 RPS6KA6Q9UK32 745 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 SAMD4AQ9UPU9 718 aaKnown RBP11.83□□□□□ -0.52
VMP1-202ENST00000585847 MAP4K5Q9Y4K4 846 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 PCDHGB3Q9Y5G1 929 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 CLDN16Q9Y5I7 305 aa11.83□□□□□ -0.52
VMP1-202ENST00000585847 TCRBV3S1A0A5B6 114 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 OR2W5A6NFC9 320 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 WASHC1A8K0Z3 465 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 DYRK3O43781 588 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CTNSO60931 367 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 COQ9O75208 318 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 ENTPD5O75356 428 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 PDE9AO76083 593 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CPSF4O95639 269 aaKnown RBP11.82□□□□□ -0.52
VMP1-202ENST00000585847 RECKO95980 971 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 UMODP07911 640 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 SLC35E2P0CK97 266 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CPMP14384 443 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 SLC7A1P30825 629 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 PCGF2P35227 344 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 SOAT1P35610 550 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 KHKP50053 298 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CXADRP78310 365 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
VMP1-202ENST00000585847 PLIN5Q00G26 463 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 GAB1Q13480 694 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 RGNQ15493 299 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MPEG1Q2M385 716 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms