RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 LUZP4Q9P127 313 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MAP10Q9P2G4 905 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MARCOQ9UEW3 520 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 SHANK1Q9Y566 2161 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MYOCOSA0A1B0GUC4 107 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 ACOT7O00154 380 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 WWP2O00308 870 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 TP53I11O14683 189 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 TO15178 435 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 HDAC3O15379 428 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 PDPK1O15530 556 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 ABCB7O75027 752 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 PEX11AO75192 247 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 SOX30O94993 753 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 CLPSP04118 112 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 FBXO45P0C2W1 286 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 CT62P0C5K7 136 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 BCKDHAP12694 445 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 S1PR1P21453 382 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 GPX3P22352 226 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 SSTR4P31391 388 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 SOX3P41225 446 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 PPICP45877 212 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 MRPS22P82650 360 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 RBPJQ06330 500 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 MGAT2Q10469 447 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 NTRK2Q16620 822 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 MAPKAPK3Q16644 382 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 OGFOD2Q6N063 350 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 CCDC116Q8IYX3 515 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 MMP21Q8N119 569 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 C16orf52Q8NHV5 167 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 PAQR8Q8TEZ7 354 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 ADIPOR1Q96A54 375 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 LCORQ96JN0 433 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 FRMD6Q96NE9 622 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 TRIM4Q9C037 500 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 MEAF6Q9HAF1 191 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 BCAP29Q9UHQ4 241 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 CROCCQ5TZA2 2017 aa12.77□□□□□ -0.37
PRKCSH-202ENST00000585540 ATP6AP2A0A1C7CYW4 349 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ANKRD33BA6NCL7 494 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 FRG2CA6NGY1 282 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 SCAMP2O15127 329 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ATP6AP2O75787 350 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 NADKO95544 446 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 CBX7O95931 251 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 P04436 131 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 KITP10721 976 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 LBPP18428 481 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 CNR1P21554 472 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 DRD5P21918 477 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ALDH6A1Q02252 535 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 RPS6KA2Q15349 733 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF791Q3KP31 576 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 IL20RBQ6UXL0 311 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 CAMKMTQ7Z624 323 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF227Q86WZ6 799 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 FBXW8Q8N3Y1 598 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ZFP62Q8NB50 900 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 OR52R1Q8NGF1 315 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 OR9A2Q8NGT5 310 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 PIWIL2Q8TC59 973 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 CKAP2Q8WWK9 683 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 MOAP1Q96BY2 351 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 C7orf26Q96N11 449 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 AMDHD1Q96NU7 426 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 TSSK3Q96PN8 268 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 BTBD9Q96Q07 612 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 NUF2Q9BZD4 464 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 C3orf14Q9HBI5 128 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 HHATLQ9HCP6 504 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 SLCO1B3Q9NPD5 702 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 ANKRD10Q9NXR5 420 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 BOD1L1Q8NFC6 3051 aa12.76□□□□□ -0.37
PRKCSH-202ENST00000585540 CFAP46Q8IYW2 2715 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 ANKUB1A6NFN9 424 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 HRKO00198 91 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 PEX1O43933 1283 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 OR6B1O95007 311 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 CBX6O95503 412 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 F10P00742 488 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF24P17028 368 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 TACR1P25103 407 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 FASNP49327 2511 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 TDGF1P3P51864 188 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 PSMD4P55036 377 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 CLDN8P56748 225 aa12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 IRX1P78414 480 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNHIT3Q15649 155 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms