RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MAGEB16A2A368 324 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 URADA6NGE7 173 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ARHGAP42A6NI28 874 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 YDJCA8MPS7 323 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM114B3SHH9 223 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TCP10L2B9ZVM9 353 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 SLCO1B7G3V0H7 640 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 H0YAE9 185 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 H0YIN7 160 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 H7C0C1 242 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF701M0R085 212 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PRPSAP2O60256 369 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PAGE4O60829 102 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 AVILO75366 819 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PIAS1O75925 651 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 OR2C1O95371 312 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TNFAIP8O95379 198 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CLPTM1O96005 669 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 EDN1P05305 212 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 KRT19P08727 400 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 FAM200BP0CF97 657 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 IGHV4-38-2P0DP08 117 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RALBP11234 206 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 COX4I1P13073 169 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 SELLP14151 372 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 GABRB1P18505 474 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 FDFT1P37268 417 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MAGEA8P43361 318 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ATP5OP48047 213 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ALDH3B2P48448 385 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RPL34P49207 117 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CSRP3P50461 194 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 BASP1P80723 227 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PRKCEQ02156 737 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 SULT2A1Q06520 285 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 APOFQ13790 326 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CYLC2Q14093 348 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MXD4Q14582 209 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RFTN1Q14699 578 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PCLAFQ15004 111 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 EMC2Q15006 297 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 HERC3Q15034 1050 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CCDC14Q49A88 953 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CDONQ4KMG0 1287 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CFAP157Q5JU67 520 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CYP4A22Q5TCH4 519 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 LPCAT4Q643R3 524 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PDPK2PQ6A1A2 396 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CNSTQ6PJW8 725 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 DHRS4L2Q6PKH6 230 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TSSK4Q6SA08 328 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 LCLAT1Q6UWP7 414 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PACS1Q6VY07 963 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF534Q76KX8 674 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM110Q86TL2 294 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 SETD3Q86TU7 594 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF410Q86VK4 478 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ERI1Q8IV48 349 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CCDC60Q8IWA6 550 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CTAGE3PQ8IX95 158 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PQLC3Q8N755 202 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RDH11Q8TC12 318 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MIPOL1Q8TD10 442 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 SLC26A7Q8TE54 656 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PPP4R1Q8TF05 950 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RXFP2Q8WXD0 754 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ARNTL2Q8WYA1 636 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CDKL2Q92772 493 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TOP1MTQ969P6 601 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 FAM162AQ96A26 154 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CATSPER2Q96P56 530 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PEBP4Q96S96 227 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 CPXM1Q96SM3 734 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF670Q9BS34 389 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 FZD8Q9H461 694 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF385DQ9H6B1 395 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MRM3Q9HC36 420 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 RPS10P5Q9NQ39 176 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MRPL40Q9NQ50 206 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF302Q9NR11 478 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 MTMR10Q9NXD2 777 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 UTP6Q9NYH9 597 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 UBAP1Q9NZ09 502 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM181Q9P2C4 612 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 COPG2Q9UBF2 871 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 OR14J1Q9UGF5 321 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PCSK1NQ9UHG2 260 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 ARID2Q68CP9 1835 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TRAV34A0A0B4J273 112 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 GOLGA8QA0A0J9YX86 632 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 A0A0U1RQK1 487 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TRBC2A0A5B9 178 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 C1orf226A1L170 272 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF320A2RRD8 509 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 GOLGA8OA6NCC3 632 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 E9PBE3 544 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 GOLGA8NF8WBI6 632 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 H7C423 109 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PLOD2O00469 737 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 UGT1A9O60656 530 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms