RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ANP32EQ9BTT0 268 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 ERVK-6Q9BXR3 956 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 GALNT9Q9HCQ5 603 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 INTS10Q9NVR2 710 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 ARMCX1Q9P291 453 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 PROCRQ9UNN8 238 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 ERVK-19Q9WJR5 959 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 CMYA5Q8N3K9 4069 aa6.88□□□□□ -1.31
SMARCE1-217ENST00000580654 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 GRID2IPA4D2P6 1211 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 B4DXG7 233 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 H0YC42 278 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 PFDN6O15212 129 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 KIAA0513O60268 411 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 APRTP07741 180 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 GPC1P35052 558 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 GZMKP49863 264 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 TPD52P55327 224 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 DSCR9P59020 149 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 B3GALT5-AS1P59052 145 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 PCDH1Q08174 1060 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 OASLQ15646 514 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 NRF1Q16656 503 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 CR1LQ2VPA4 569 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 ZNF470Q6ECI4 717 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 NEPROQ6NW34 567 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 SEZ6L2Q6UXD5 910 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 RNF111Q6ZNA4 994 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 SLC29A4Q7RTT9 530 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 UBE3DQ7Z6J8 389 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 THOC6Q86W42 341 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 IFNEQ86WN2 208 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 PRR22Q8IZ63 422 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 TAGAPQ8N103 731 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 ATG4AQ8WYN0 398 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 CCT6BQ92526 530 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 DGAT2Q96PD7 388 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 NODALQ96S42 347 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 ACTR6Q9GZN1 396 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 REXO4Q9GZR2 422 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 IL22Q9GZX6 179 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 LYRM4Q9HD34 91 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 ARL15Q9NXU5 204 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 NOP53Q9NZM5 478 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 PTBP2Q9UKA9 531 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 IKZF3Q9UKT9 509 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 EXO1Q9UQ84 846 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-217ENST00000580654 IQANK1A0A1B0GTG1 560 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 C2orf92A0A1B0GVN3 265 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CDC7O00311 574 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 TMPRSS2O15393 492 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ICOSLGO75144 302 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 PRKRAO75569 313 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CLEC3AO75596 197 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CD3EP07766 207 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ABCB1P08183 1280 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 RHOXF2BP0C7M4 288 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ZSCAN5DPP0CG00 497 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 COX7A2P14406 83 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 HNF1AP20823 631 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 USF1P22415 310 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 GCKP35557 465 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 NPY2RP49146 381 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 SUCLG1P53597 346 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 RWDD2BP57060 319 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 UBASH3AP57075 661 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ZNF267Q14586 743 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CTU2Q2VPK5 515 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 MIDNQ504T8 468 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 C11orf71Q6IPW1 123 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 TMEM81Q6P7N7 255 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 TRIM40Q6P9F5 258 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 TMIGD1Q6UXZ0 262 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 GOLGA6L1Q8N7Z2 621 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 BBOF1Q8ND07 529 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 FNDC9Q8TBE3 224 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ZFAND2BQ8WV99 257 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 PROX1Q92786 737 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 HGDQ93099 445 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ADIPOR1Q96A54 375 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 TP53INP1Q96A56 240 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CCDC42Q96M95 316 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 F2RL3Q96RI0 385 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 SOX7Q9BT81 388 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 CACNG6Q9BXT2 260 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 NAT10Q9H0A0 1025 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ZNF696Q9H7X3 374 aa6.86□□□□□ -1.31
SMARCE1-217ENST00000580654 ACTR8Q9H981 624 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms