RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 SPINK14Q6IE38 97 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 C3P1Q6ZMU1 363 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 ZNF793Q6ZN11 406 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 DGAT2L6Q6ZPD8 337 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 C3orf62Q6ZUJ4 267 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 GALNT7Q86SF2 657 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 FJX1Q86VR8 437 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 OR4N5Q8IXE1 308 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 CENPLQ8N0S6 344 aaPredicted RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 NKAPQ8N5F7 415 aaKnown RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 CAMKVQ8NCB2 501 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 NFAM1Q8NET5 270 aaPredicted RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 NT5CQ8TCD5 201 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 NACC2Q96BF6 587 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 LRRC39Q96DD0 335 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 PDLIM5Q96HC4 596 aaKnown RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 SMIM10Q96HG1 83 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 QRFPRQ96P65 431 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 F2RL3Q96RI0 385 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 GPR22Q99680 433 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 BARD1Q99728 777 aaKnown RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 HAUS8Q9BT25 410 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 NAT9Q9BTE0 207 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 H2AFJQ9BTM1 129 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 SLC29A3Q9BZD2 475 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 OR51B5Q9H339 312 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 CDCP1Q9H5V8 836 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 EPS8L2Q9H6S3 715 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 PELI2Q9HAT8 420 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 KCNK13Q9HB14 408 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 PNO1Q9NRX1 252 aaKnown RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 ZDHHC18Q9NUE0 388 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 C14orf105Q9NVL8 296 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 NINJ2Q9NZG7 142 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 CD274Q9NZQ7 290 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 ZNF490Q9ULM2 529 aaPredicted RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 OARD1Q9Y530 152 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 CLDN16Q9Y5I7 305 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 KIAA1549Q9HCM3 1950 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 NCOA6Q14686 2063 aaPredicted RBP3.7□□□□□ -1.82
DDX42-211ENST00000580108 NINQ8N4C6 2090 aa3.7□□□□□ -1.82
DDX42-211ENST00000580108 POLQO75417 2590 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 MED12Q93074 2177 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 IGKV3D-11A0A0A0MRZ8 115 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 TRBV11-1A0A0K0K1C0 115 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 A0A1W2PQ72 361 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 DYTNA2CJ06 578 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 LRIT2A6NDA9 550 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 PABPN1LA6NDY0 278 aaKnown RBP3.69□□□□□ -1.82
DDX42-211ENST00000580108 SAGE2PA6NJ88 616 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 NPIPA5E9PKD4 350 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 H0YIG0 161 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 TXNDC9O14530 226 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 PRPF4O43172 522 aaKnown RBP eCLIP3.69□□□□□ -1.82
DDX42-211ENST00000580108 LRRTM2O43300 516 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 ZNF354AO60765 605 aaPredicted RBP3.69□□□□□ -1.82
DDX42-211ENST00000580108 PRAMEF2O60811 474 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 LDB3O75112 727 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 NEURL1O76050 574 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 URI1O94763 535 aaPredicted RBP3.69□□□□□ -1.82
DDX42-211ENST00000580108 UNC5CO95185 931 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 SIX3O95343 332 aaPredicted RBP3.69□□□□□ -1.82
DDX42-211ENST00000580108 ACSL3O95573 720 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 LPLP06858 475 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 CD63P08962 238 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 PCNAP12004 261 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 MTHFD2P13995 350 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 STMN1P16949 149 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 TSPAN8P19075 237 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 HRH2P25021 359 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 ECHS1P30084 290 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 DCTP40126 519 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 GP5P40197 560 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 MSH2P43246 934 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 SLC12A2P55011 1212 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 RAB10P61026 200 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 BLOC1S1P78537 153 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 GUCY2DQ02846 1103 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 RELAQ04206 551 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 RGS1Q08116 209 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 CALCOCO2Q13137 446 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 CHIT1Q13231 466 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 NAA25Q14CX7 972 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 TGFBIQ15582 683 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 OR1C1Q15619 314 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 ZKSCAN8Q15776 578 aaPredicted RBP3.69□□□□□ -1.82
DDX42-211ENST00000580108 C3AR1Q16581 482 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 XKR6Q5GH73 641 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 ZNF766Q5HY98 468 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 ACER2Q5QJU3 275 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 C18orf63Q68DL7 685 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 PLAG1Q6DJT9 500 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 LRRC8EQ6NSJ5 796 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 FAM180AQ6UWF9 173 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 GFRALQ6UXV0 394 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 FRMD7Q6ZUT3 714 aa3.69□□□□□ -1.82
DDX42-211ENST00000580108 FRA10AC1Q70Z53 315 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms