RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 HLA-DQA1Q5Y7H0 255 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NSUN5P2Q63ZY6 315 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 OR4C11Q6IEV9 310 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 LYPD8Q6UX82 237 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TMEM64Q6YI46 380 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DGAT2L6Q6ZPD8 337 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SH2D5Q6ZV89 423 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PACS2Q86VP3 889 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 P3H2Q8IVL5 708 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 VWA5B2Q8N398 1253 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NUDT8Q8WV74 236 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TANKQ92844 425 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 UBE2E3Q969T4 207 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CMTM7Q96FZ5 175 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FBXL20Q96IG2 436 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MAGEB18Q96M61 343 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF317Q96PQ6 595 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RBBP8Q99708 897 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CENPKQ9BS16 269 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SORBS1Q9BX66 1292 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MS4A8Q9BY19 250 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DERL2Q9GZP9 239 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MS4A12Q9NXJ0 267 aa11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CNOT11Q9UKZ1 510 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-212ENST00000579175 C2orf92A0A1B0GVN3 265 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FAM171A2A8MVW0 826 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 COPEO14579 308 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SPAG7O75391 227 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ERN1O75460 977 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 IGKV3-11P04433 115 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SPRP35270 261 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GGT5P36269 586 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MAGEA12P43365 314 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CPA2P48052 419 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 WDR4P57081 412 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DMTNQ08495 405 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RCAN2Q14206 197 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TBCELQ5QJ74 424 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 C18orf63Q68DL7 685 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MED27Q6P2C8 311 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GPR180Q86V85 440 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MYLK4Q86YV6 388 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZNF473Q8WTR7 871 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RIT1Q92963 219 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RGMAQ96B86 450 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RILPQ96NA2 401 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GNRHR2Q96P88 292 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RBM24Q9BX46 236 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 WWTR1Q9GZV5 400 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 IQCGQ9H095 443 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PLEKHF2Q9H8W4 249 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CAB39LQ9H9S4 337 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 POPDC3Q9HBV1 291 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PHF11Q9UIL8 331 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RNF112Q9ULX5 631 aa11.55□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HMX2A2RU54 273 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GLOD5A6NK44 160 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GNB5O14775 395 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GLRA3O75311 464 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TRIM3O75382 744 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PRKRAO75569 313 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SNX4O95219 450 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TMIGD3P0DMS9 266 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PYGBP11216 843 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BMP7P18075 431 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 GCKP35557 465 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BUD31P41223 144 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SERPINB8P50452 374 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SEC24CP53992 1094 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 FBXW4P57775 412 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RPP38P78345 283 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 IGLV3-21P80748 117 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 POU4F1Q01851 419 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 NTRK2Q16620 822 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ZSCAN26Q16670 478 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CDKL4Q5MAI5 379 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 WIPI1Q5MNZ9 446 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 HHATQ5VTY9 493 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 KHDRBS2Q5VWX1 349 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 SHEQ5VZ18 495 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 BICRALQ6AI39 1079 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 VASNQ6EMK4 673 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 POMZP3Q6PJE2 187 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 LUZP2Q86TE4 346 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ST13P4Q8IZP2 240 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TCP10LQ8TDR4 215 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 ABTB1Q969K4 478 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 WDR34Q96EX3 536 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 TSPAN17Q96FV3 270 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CCT8L2Q96SF2 557 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 PELOQ9BRX2 385 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 MCMBPQ9BTE3 642 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 CD244Q9BZW8 370 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 RHOJQ9H4E5 214 aa11.54□□□□□ -0.56
CDK5RAP3-212ENST00000579175 WDR41Q9HAD4 459 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms