RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 VAC14Q08AM6 782 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 LASP1Q14847 261 aaKnown RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 TNFAIP8L2Q6P589 184 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 BHLHB9Q6PI77 547 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 NET1Q7Z628 596 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 ANKRD37Q7Z713 158 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 CALHM3Q86XJ0 350 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 NLGN4XQ8N0W4 816 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 NLGN4YQ8NFZ3 816 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 METTL21AQ8WXB1 218 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 YIPF4Q9BSR8 244 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 PCDHAC1Q9H158 963 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 C19orf53Q9UNZ5 99 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 ERVK-19Q9WJR5 959 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 AP3M1Q9Y2T2 418 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 A0A087WV62 115 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 STMND1H3BQB6 276 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 CIB2O75838 187 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 CBX7O95931 251 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 NUDT7P0C024 238 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 S1PR1P21453 382 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 SSTR4P31391 388 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 GALNSP34059 522 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 GZMMP51124 257 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 OR4D2P58180 307 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 ELAVL1Q15717 326 aaKnown RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 OR2T12Q8NG77 320 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 FBXO30Q8TB52 745 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 GIMAP5Q96F15 307 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 OTUB1Q96FW1 271 aaPredicted RBP22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 C16orf58Q96GQ5 468 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 MS4A4EQ96PG1 132 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 ZNF639Q9UID6 485 aa22.43■■□□□ 1.18
ATPAF1-213ENST00000574428 IGHV3-20A0A0C4DH32 117 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 CDRT15L2A8MXV6 281 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 RAD1O60671 282 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 UMODP07911 640 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 DUSP8Q13202 625 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 MAP7Q14244 749 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 SERPINA11Q86U17 422 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 HORMAD2Q8N7B1 307 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 OR52R1Q8NGF1 315 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 OR2Y1Q8NGV0 311 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 RAD21L1Q9H4I0 556 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 ASCL3Q9NQ33 180 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 SUCOQ9UBS9 1254 aaKnown RBP22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 CLCA3PQ9Y6N3 262 aa22.42■■□□□ 1.18
ATPAF1-213ENST00000574428 DNAJA2O60884 412 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 FADDQ13158 208 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 SPATS1Q496A3 300 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 SFT2D3Q587I9 215 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 WDR53Q7Z5U6 358 aaPredicted RBP22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 C7orf57Q8NEG2 295 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 RNPEPL1Q9HAU8 725 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 EGFL7Q9UHF1 273 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 BCAP29Q9UHQ4 241 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 POMPQ9Y244 141 aa22.41■■□□□ 1.18
ATPAF1-213ENST00000574428 FAM220BPB1ANY3 271 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 IFI6P09912 130 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 MATN1P21941 496 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 FOLR3P41439 243 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 STAT5AP42229 794 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 RPS18P62269 152 aaKnown RBP22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 MS4A2Q01362 244 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 ADRM1Q16186 407 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 MFSD12Q6NUT3 480 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 OR5D16Q8NGK9 328 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 JADE3Q92613 823 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 MAL2Q969L2 176 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 C8orf44Q96CB5 159 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 SENP5Q96HI0 755 aaPredicted RBP22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 REXO5Q96IC2 774 aaKnown RBP22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 OR51I1Q9H343 314 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 TNFRSF21O75509 655 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 PSMG1O95456 288 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 RAB40ALP0C0E4 278 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 CAMK2BQ13554 666 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 TMEM205Q6UW68 189 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 PTOV1Q86YD1 416 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 ZZZ3Q8IYH5 903 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 ZNF321PQ8N8H1 164 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 RAB8BQ92930 207 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 OR8D2Q9GZM6 311 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 NKX1-2Q9UD57 310 aaPredicted RBP22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 FAF1Q9UNN5 650 aaPredicted RBP22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 PADI2Q9Y2J8 665 aa22.4■■□□□ 1.18
ATPAF1-213ENST00000574428 SYNDIG1LA6NDD5 238 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 DYRK3O43781 588 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 DDAH2O95865 285 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 CYC1P08574 325 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 KHKP50053 298 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 DSTNP60981 165 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 FUT7Q11130 342 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 FOXC1Q12948 553 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 TRIM25Q14258 630 aaKnown RBP22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 GCNT6Q5T4J0 391 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 C1orf146Q5VVC0 180 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 MICU2Q8IYU8 434 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 OR14A16Q8NHC5 309 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms