RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 SIMC1Q8NDZ2 872 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 ELP4Q96EB1 424 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 PLA2G3Q9NZ20 509 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 PRODH2Q9UF12 536 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 COL6A6A6NMZ7 2263 aa30.69■■■□□ 2.5
CTDNEP1-209ENST00000574205 C2orf92A0A1B0GVN3 265 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 OR2J2O76002 312 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 KIR3DL1P43629 444 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 DUSP8Q13202 625 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 GLB1L3Q8NCI6 653 aaPredicted RBP30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 ANKRA2Q9H9E1 313 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 ZIM2Q9NZV7 527 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 SMG1Q96Q15 3661 aaKnown RBP30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 OR5H15A6NDH6 313 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 WWP2O00308 870 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 C16orf47Q6ZP98 133 aaPredicted RBP30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 OR2L13Q8N349 312 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 TEX19Q8NA77 164 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 ZBTB18Q99592 522 aa30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 UTP23Q9BRU9 249 aaKnown RBP30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 DDX18Q9NVP1 670 aaKnown RBP30.68■■■□□ 2.5
CTDNEP1-209ENST00000574205 KALRNO60229 2985 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 EFNA1P20827 205 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 TRHRP34981 398 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 CASRP41180 1078 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 MRPL19P49406 292 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 EMDP50402 254 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 SSR4P51571 173 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 KLRB1Q12918 225 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 NFATC3Q12968 1075 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 SPANXN4Q5MJ08 99 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 HLA-DQA1Q5Y7H0 255 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 OR4F3Q6IEY1 312 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 CGB2Q6NT52 195 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 MIER2Q8N344 545 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 C17orf47Q8NEP4 570 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 OR5P2Q8WZ92 322 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 TP53INP1Q96A56 240 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 RILPQ96NA2 401 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 RASL10BQ96S79 203 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 RYDENQ9NUL5 291 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 TAS2R9Q9NYW1 312 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 RALYQ9UKM9 306 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 C19orf53Q9UNZ5 99 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 CSAG2Q9Y5P2 127 aa30.67■■■□□ 2.5
CTDNEP1-209ENST00000574205 UPK1AO00322 258 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 COQ9O75208 318 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 SLC22A3O75751 556 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 F10P00742 488 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 GPX3P22352 226 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 IL12AP29459 219 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 STX1BP61266 288 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 IRX1P78414 480 aaPredicted RBP30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 TUBA3CQ13748 450 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 FAM174BQ3ZCQ3 159 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 TUBA3EQ6PEY2 450 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 Q6ZS92 163 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 TMEM156Q8N614 296 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 ZNF441Q8N8Z8 693 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 ADIPOR1Q96A54 375 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 CHMP6Q96FZ7 201 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 NEUROD4Q9HD90 331 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 B3GNT3Q9Y2A9 372 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 DTX4Q9Y2E6 619 aa30.66■■■□□ 2.5
CTDNEP1-209ENST00000574205 RNASET2O00584 256 aaKnown RBP30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 TNFSF10P50591 281 aa30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 CDK9P50750 372 aaKnown RBP30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 PTRH1Q86Y79 214 aaKnown RBP30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 VPS37AQ8NEZ2 397 aa30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 TMEM120AQ9BXJ8 343 aa30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 ANKRD10Q9NXR5 420 aa30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 HEMK1Q9Y5R4 338 aaPredicted RBP30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 NUP214P35658 2090 aaPredicted RBP30.65■■■□□ 2.5
CTDNEP1-209ENST00000574205 S100A3P33764 101 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 CD96P40200 585 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 CYB561P49447 251 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 GYS2P54840 703 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 WNT3P56703 355 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 TLR1Q15399 786 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 PIGGQ5H8A4 983 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 ANXA8L1Q5VT79 327 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 SLC6A19Q695T7 634 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 PSMA8Q8TAA3 256 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 SLC22A8Q8TCC7 542 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 ITPAQ9BY32 194 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 MFRPQ9BY79 579 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP30.64■■■□□ 2.51e-37■■□□□ 14.3
CTDNEP1-209ENST00000574205 TRIM45Q9H8W5 580 aaPredicted RBP30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 TRIM33Q9UPN9 1127 aa30.64■■■□□ 2.5
CTDNEP1-209ENST00000574205 C6orf47O95873 294 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 ST13P50502 369 aaKnown RBP30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 HLCSP50747 726 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 DCAF7P61962 342 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 OC90Q02509 493 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 NADK2Q4G0N4 442 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 ZNF468Q5VIY5 522 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 SLC15A4Q8N697 577 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 CATSPER1Q8NEC5 780 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 ASB15Q8WXK1 588 aa30.63■■■□□ 2.49
CTDNEP1-209ENST00000574205 PNPLA2Q96AD5 504 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms