RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
NDE1-209ENST00000574109 RNF32Q9H0A6 362 aa12.61□□□□□ -0.39
NDE1-209ENST00000574109 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
NDE1-209ENST00000574109 EPS8L2Q9H6S3 715 aa12.61□□□□□ -0.39
NDE1-209ENST00000574109 SAR1AQ9NR31 198 aa12.61□□□□□ -0.39
NDE1-209ENST00000574109 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
NDE1-209ENST00000574109 ATMQ13315 3056 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 NDUFAB1O14561 156 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 RFXANKO14593 260 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ANGPT2O15123 496 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ACOX3O15254 700 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 PSMG1O95456 288 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 C6orf47O95873 294 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 CBX7O95931 251 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 CT62P0C5K7 136 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ITGAMP11215 1152 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SOAT1P35610 550 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SOX11P35716 441 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 TRPC1P48995 793 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 TMED10P49755 219 aaKnown RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 ANXA11P50995 505 aaKnown RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 POLE2P56282 527 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 WNT3P56703 355 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 RNF4P78317 190 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 MRPS35P82673 323 aaKnown RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 MGAT2Q10469 447 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 MEP1AQ16819 746 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SPDYE7PQ495Y7 208 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 FHL5Q5TD97 284 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ABHD17BQ5VST6 288 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 FAM180BQ6P0A1 224 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 GPALPP1Q8IXQ4 340 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SLC15A4Q8N697 577 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ZNF615Q8N8J6 731 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 CCDC197Q8NCU1 140 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ADCY4Q8NFM4 1077 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 OR52R1Q8NGF1 315 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 OR4A15Q8NGL6 344 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 BRIX1Q8TDN6 353 aaKnown RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 TP53INP1Q96A56 240 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 PANX1Q96RD7 426 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 NMUR2Q9GZQ4 415 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 WWTR1Q9GZV5 400 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 ZCCHC3Q9NUD5 404 aaKnown RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 BCAP29Q9UHQ4 241 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 LEF1Q9UJU2 399 aaPredicted RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 VPS4AQ9UN37 437 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 ZNF451Q9Y4E5 1061 aa12.6□□□□□ -0.39
NDE1-209ENST00000574109 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
NDE1-209ENST00000574109 TLN1Q9Y490 2541 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 MYOCOSA0A1B0GUC4 107 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 A0A1W2PP18 115 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SCN2BO60939 215 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 ZCCHC18P0CG32 403 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 S1PR1P21453 382 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 UQCRC2P22695 453 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SSTR4P31391 388 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 CASRP41180 1078 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 PRIM2P49643 509 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 CDK9P50750 372 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 NRG3P56975 720 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 HBA1P69905 142 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 Q0VFX4 171 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 ZNF155Q12901 538 aaPredicted RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 MFAP5Q13361 173 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 PRSS53Q2L4Q9 553 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 COL28A1Q2UY09 1125 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 FAM111BQ6SJ93 734 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 DGAT2L6Q6ZPD8 337 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 TAGAPQ8N103 731 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 CDRT4Q8N9R6 151 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 KAT2AQ92830 837 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 FAM120BQ96EK7 910 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 WBP1Q96G27 269 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 BTBD9Q96Q07 612 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 LMF1Q96S06 567 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 NUDT9Q9BW91 350 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 ZNF223Q9UK11 482 aaPredicted RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 YARS2Q9Y2Z4 477 aaKnown RBP12.59□□□□□ -0.39
NDE1-209ENST00000574109 SNX8Q9Y5X2 465 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 SPTA1P02549 2419 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
NDE1-209ENST00000574109 KMT2BQ9UMN6 2715 aaPredicted RBP12.58□□□□□ -0.4
NDE1-209ENST00000574109 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
NDE1-209ENST00000574109 C2orf92A0A1B0GVN3 265 aa12.58□□□□□ -0.4
NDE1-209ENST00000574109 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
NDE1-209ENST00000574109 CAPN14A8MX76 684 aa12.58□□□□□ -0.4
NDE1-209ENST00000574109 UPK1AO00322 258 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms