RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CLMPQ9H6B4 373 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 NUP214P35658 2090 aaPredicted RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 DOCK8Q8NF50 2099 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 FAM227AF5H4B4 570 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 XKRYO14609 159 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 SOD1P00441 154 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 ACPPP15309 386 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 CTSKP43235 329 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 CLK1P49759 484 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 HBA1P69905 142 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 CEACAM7Q14002 265 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TPRG1LQ5T0D9 272 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 C6orf52Q5T4I8 152 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 TYW3Q6IPR3 259 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 OR52P1PQ8NH57 321 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 CHTF18Q8WVB6 975 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 CLDN23Q96B33 292 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 DCBLD2Q96PD2 775 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 RBM4BQ9BQ04 359 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 RBM4Q9BWF3 364 aaKnown RBP9.53□□□□□ -0.88
SMG6-213ENST00000573166 TMEM45AQ9NWC5 275 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 PCDHGA5Q9Y5G8 931 aa9.53□□□□□ -0.88
SMG6-213ENST00000573166 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 CPSF4LA6NMK7 179 aaKnown RBP9.52□□□□□ -0.88
SMG6-213ENST00000573166 A8MVJ9 347 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 RFPL3O75679 317 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 IFNGP01579 166 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 PRKAR1AP10644 381 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 MYL12AP19105 171 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 CLCN2P51788 898 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 ZNF41P51814 821 aaPredicted RBP9.52□□□□□ -0.88
SMG6-213ENST00000573166 KCNC4Q03721 635 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 WDR53Q7Z5U6 358 aaPredicted RBP9.52□□□□□ -0.88
SMG6-213ENST00000573166 KMT5CQ86Y97 462 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 LAS2Q8IYD9 372 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 PRR22Q8IZ63 422 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 SLC5A8Q8N695 610 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 LINC01555Q8NAE3 123 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 OR52R1Q8NGF1 315 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 TM4SF18Q96CE8 201 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 SLC6A20Q9NP91 592 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.88
SMG6-213ENST00000573166 HPF1Q9NWY4 346 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 NXT1Q9UKK6 140 aaKnown RBP9.52□□□□□ -0.88
SMG6-213ENST00000573166 TPRKBQ9Y3C4 175 aa9.52□□□□□ -0.88
SMG6-213ENST00000573166 PATJQ8NI35 1801 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 A6NHS1 94 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 EML2O95834 649 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 TSFMP43897 325 aaKnown RBP9.52□□□□□ -0.89
SMG6-213ENST00000573166 RHDQ02161 417 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 ST3GAL3Q11203 375 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 RGNQ15493 299 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 LIN52Q52LA3 116 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 FRMPD2BQ6IN97 320 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 ZNF544Q6NX49 715 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 HACD2Q6Y1H2 254 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 NUP54Q7Z3B4 507 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 DPP10Q8N608 796 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 ENDOVQ8N8Q3 282 aaKnown RBP9.52□□□□□ -0.89
SMG6-213ENST00000573166 BPIFB6Q8NFQ5 453 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 OR2A14Q96R47 310 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 PPP4R1LQ9P1A2 415 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 KCND3Q9UK17 655 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 A0A1B0GTL3 188 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 BLACEA4D250 179 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 NOBOXO60393 691 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 CSO75390 466 aaKnown RBP9.52□□□□□ -0.89
SMG6-213ENST00000573166 P04436 131 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 HTR1EP28566 365 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 PAPD4Q6PIY7 484 aaKnown RBP9.52□□□□□ -0.89
SMG6-213ENST00000573166 FAM111BQ6SJ93 734 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 LUZP2Q86TE4 346 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 ADCK1Q86TW2 530 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 OR5D16Q8NGK9 328 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 POLR2J3Q9H1A7 115 aaKnown RBP9.52□□□□□ -0.89
SMG6-213ENST00000573166 SPNS1Q9H2V7 528 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 SEMA4GQ9NTN9 838 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 CLN6Q9NWW5 311 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 DKKL1Q9UK85 242 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 DAPP1Q9UN19 280 aa9.52□□□□□ -0.89
SMG6-213ENST00000573166 CDC14CA4D256 554 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FURINP09958 794 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FASLGP48023 281 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SNAPC1Q16533 368 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 SPATS1Q496A3 300 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 PTCHD4Q6ZW05 846 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 MAVSQ7Z434 540 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 ARHGAP22Q7Z5H3 698 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 PAQR7Q86WK9 346 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 CARM1Q86X55 608 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 GTF2H4Q92759 462 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 FAM192AQ9GZU8 254 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 NME4O00746 187 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 RAB15P59190 212 aa9.51□□□□□ -0.89
SMG6-213ENST00000573166 NCF4Q15080 339 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms