RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 DTD2Q96FN9 168 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 PRRC1Q96M27 445 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 DPEP2Q9H4A9 486 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 PELI2Q9HAT8 420 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 SLAMF7Q9NQ25 335 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ACSS1Q9NUB1 689 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MALT1Q9UDY8 824 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ABT1Q9ULW3 272 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 NDRG2Q9UN36 371 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 LZTS3O60299 673 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 FAPQ12884 760 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 SYPL1Q16563 259 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF57Q68EA5 555 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 BHLHB9Q6PI77 547 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 WDR53Q7Z5U6 358 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ZER1Q7Z7L7 766 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ADIPOR2Q86V24 386 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MARCH9Q86YJ5 346 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 GJD3Q8N144 294 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 GNPDA2Q8TDQ7 276 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 HCAR2Q8TDS4 363 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 RGMAQ96B86 450 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 TM9SF2Q99805 663 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 IRF2BPLQ9H1B7 796 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 YARS2Q9Y2Z4 477 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 CASP8AP2Q9UKL3 1982 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 TRDV1A0A1B0GX56 115 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 PLA2G10O15496 165 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 LYRM1O43325 122 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 AKAP8O43823 692 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MYCP01106 439 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 RPN2P04844 631 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CHRNB1P11230 501 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 APEX1P27695 318 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FGF9P31371 208 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TAS2R41P59536 307 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CDK5Q00535 292 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TMC8Q8IU68 726 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 OR4D11Q8NGI4 311 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SORCS1Q8WY21 1168 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MYLIPQ8WY64 445 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 NR4A3Q92570 626 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 BBS4Q96RK4 519 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MS4A8Q9BY19 250 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SPHK2Q9NRA0 654 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ZCCHC3Q9NUD5 404 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TAC3Q9UHF0 121 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 PRRC2BQ5JSZ5 2229 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 C8AP07357 584 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CFL1P23528 166 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 HOXC5Q00444 222 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ENTPD8Q5MY95 495 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 LHX8Q68G74 356 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 C1orf94Q6P1W5 598 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 DCUN1D3Q8IWE4 304 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 LRRC56Q8IYG6 542 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SYT14Q8NB59 555 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SMG7Q92540 1137 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 NUS1Q96E22 293 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CHFRQ96EP1 664 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 OTUB1Q96FW1 271 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FAIM2Q9BWQ8 316 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 BTBD1Q9H0C5 482 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 DIABLOQ9NR28 239 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ACOXLQ9NUZ1 547 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 H2AFY2Q9P0M6 372 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 C5AR2Q9P296 337 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 C17orf113A0A1B0GUU1 675 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TGM5O43548 720 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 INHAP05111 366 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 HSD17B2P37059 387 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CCR8P51685 355 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CDH11P55287 796 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MAB21L1Q13394 359 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 DSG2Q14126 1118 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SF3A2Q15428 464 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CCDC85BQ15834 202 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FAM83HQ6ZRV2 1179 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FAM129CQ86XR2 697 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 KLHL36Q8N4N3 616 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TM9SF4Q92544 642 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ZC3HAV1LQ96H79 300 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SAP130Q9H0E3 1048 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 PCBD2Q9H0N5 130 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 RHBGQ9H310 441 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 PLAGL1Q9UM63 463 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ITM2BQ9Y287 266 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ASB4Q9Y574 426 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CLCA3PQ9Y6N3 262 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FAM170BA6NMN3 283 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SEMA7AO75326 666 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TP53P04637 393 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SERPIND1P05546 499 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ALAS2P22557 587 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 BSGP35613 385 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms