RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PDFQ9HBH1 243 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ZBTB20Q9HC78 741 aaPredicted RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 TM9SF3Q9HD45 589 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GDF3Q9NR23 364 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ZNF624Q9P2J8 865 aaPredicted RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CORO1CQ9ULV4 474 aaPredicted RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 NEU3Q9UQ49 428 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LYVE1Q9Y5Y7 322 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ALG6Q9Y672 507 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 FANCMQ8IYD8 2048 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PIEZO1Q92508 2521 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ATG2BQ96BY7 2078 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 NEMP2A6NFY4 417 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 MIF4GDA9UHW6 222 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 SMIM1B2RUZ4 78 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 BLOC1S5-TXNDC5H3BN57 136 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 PLK4O00444 970 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CDX4O14627 284 aaPredicted RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 SLC31A1O15431 190 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 FLRT2O43155 660 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 ZG16O60844 167 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 GPC4O75487 556 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TM7SF2O76062 418 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TRIM16O95361 564 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CD160O95971 181 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CTSLP07711 333 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CCDC175P0C221 793 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TCF4P15884 667 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CTNNA2P26232 953 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 MAT2AP31153 395 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 DEKP35659 375 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 ARL3P36405 182 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 MSH2P43246 934 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RABIFP47224 123 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 ARSEP51690 589 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 THOP1P52888 689 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RWDD2BP57060 319 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RPL26P61254 145 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 SLC10A7Q0GE19 358 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 AP1B1Q10567 949 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CYTH1Q15438 398 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TFDP3Q5H9I0 405 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 PIP5KL1Q5T9C9 394 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 NCBP2-AS2Q69YL0 99 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 FAAH2Q6GMR7 532 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TMEM154Q6P9G4 183 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CYP4V2Q6ZWL3 525 aaPredicted RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 PEX26Q7Z412 305 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 KATNAL2Q8IYT4 538 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 TEX26Q8N6G2 289 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 NPWQ8N729 165 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 OR6K2Q8NGY2 324 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 EXD1Q8NHP7 514 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 SETD7Q8WTS6 366 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 PDCD6IPQ8WUM4 868 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 TFB1MQ8WVM0 346 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 SMPDL3BQ92485 455 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 HDAC2Q92769 488 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 HAUS1Q96CS2 278 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 FAF2Q96CS3 445 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 HDAC11Q96DB2 347 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 CMTM3Q96MX0 182 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 DACH2Q96NX9 599 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 PPP1R2P1Q96PQ5 205 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RNF157Q96PX1 679 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 ALS2CR12Q96Q35 445 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 VAT1Q99536 393 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 LITAFQ99732 161 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 MGME1Q9BQP7 344 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RBM22Q9NW64 420 aaKnown RBP eCLIP3.67□□□□□ -1.82
NUP88-202ENST00000570937 DNPEPQ9ULA0 475 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 RPL26L1Q9UNX3 145 aaKnown RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 TTLL3Q9Y4R7 772 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 HEY1Q9Y5J3 304 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 FADS3Q9Y5Q0 445 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 SESN1Q9Y6P5 492 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 PTPRZ1P23471 2315 aaPredicted RBP3.67□□□□□ -1.82
NUP88-202ENST00000570937 MYO15AQ9UKN7 3530 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 DMXL1Q9Y485 3027 aa3.67□□□□□ -1.82
NUP88-202ENST00000570937 MYO18AQ92614 2054 aaKnown RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 TSPAN11A1L157 253 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 MACROD2A1Z1Q3 448 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 OR2M5A3KFT3 312 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PGPEP1LA6NFU8 196 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 IGLON5A6NGN9 336 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 MYO1GB0I1T2 1018 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 HACD1B0YJ81 288 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 HS6ST1O60243 411 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 CST8O60676 142 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PIGNO95427 931 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 JCHAINP01591 159 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 APOHP02749 345 aaPredicted RBP3.66□□□□□ -1.82
NUP88-202ENST00000570937 CD48P09326 243 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 PATE4P0C8F1 98 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 THEGLP0DJG4 465 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ERVK-10P10266 1014 aa3.66□□□□□ -1.82
NUP88-202ENST00000570937 ALPPL2P10696 532 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms