RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FOXO1Q12778 655 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 PRSS53Q2L4Q9 553 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 UGT3A2Q3SY77 523 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 PRAMEF20Q5VT98 475 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 HLA-DQA1Q5Y7H0 255 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 SLC22A10Q63ZE4 541 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 HIST2H2BCQ6DN03 193 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 FAM71E1Q6IPT2 247 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 NOXRED1Q6NXP6 359 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 Q6ZSR9 355 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 CCDC116Q8IYX3 515 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 SAMD14Q8IZD0 417 aaPredicted RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 FAM13CQ8NE31 585 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 OR52R1Q8NGF1 315 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 OR9A2Q8NGT5 310 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 OR6Y1Q8NGX8 325 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 CCDC120Q96HB5 630 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 METTL2AQ96IZ6 378 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 ZIM3Q96PE6 472 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 ITPAQ9BY32 194 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 NXF5Q9H1B4 397 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 ZDHHC11Q9H8X9 412 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 IL1RL2Q9HB29 575 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 LRTM1Q9HBL6 345 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 PROK2Q9HC23 129 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 PFDN4Q9NQP4 134 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 SLC35C2Q9NQQ7 365 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 C1orf109Q9NX04 203 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 TUBA8Q9NY65 449 aaPredicted RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 BCAP29Q9UHQ4 241 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 CNOT11Q9UKZ1 510 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 EXO1Q9UQ84 846 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 ENTPD4Q9Y227 616 aa12□□□□□ -0.49
CNOT1-220ENST00000569916 DIDO1Q9BTC0 2240 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 SPTBN1Q01082 2364 aaKnown RBP12□□□□□ -0.49
CNOT1-220ENST00000569916 A0A1B0GTH9 108 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 RGS14O43566 566 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 CDC40O60508 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNOT1-220ENST00000569916 SEC22BO75396 215 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 LRATO95237 230 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 FGF4P08620 206 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 ABOP16442 354 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TACR1P25103 407 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 SERPINB5P36952 375 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 EMDP50402 254 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 CASP6P55212 293 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 C2orf80Q0P641 193 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 RPS6KA2Q15349 733 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 NNATQ16517 81 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 HYAL4Q2M3T9 481 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TNFAIP8L3Q5GJ75 292 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 RGS9BPQ6ZS82 235 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 IKBIPQ70UQ0 350 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 MAMDC2Q7Z304 686 aaPredicted RBP11.99□□□□□ -0.49
CNOT1-220ENST00000569916 EXOC3L1Q86VI1 746 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 SLC22A16Q86VW1 577 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TICAM1Q8IUC6 712 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 PRR22Q8IZ63 422 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TMEM251Q8N6I4 163 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 OR5M3Q8NGP4 307 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TWIST2Q8WVJ9 160 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 FCRL1Q96LA6 429 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 ANKRA2Q9H9E1 313 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 SSU72Q9NP77 194 aaKnown RBP11.99□□□□□ -0.49
CNOT1-220ENST00000569916 MIEF1Q9NQG6 463 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 CNIH4Q9P003 139 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 CFL2Q9Y281 166 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 TRAF6Q9Y4K3 522 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 NPFFR2Q9Y5X5 522 aa11.99□□□□□ -0.49
CNOT1-220ENST00000569916 MYO7BQ6PIF6 2116 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 LRRC3CA6NJW4 275 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 MYO1GB0I1T2 1018 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 PIP5K1BO14986 540 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 LSM1O15116 133 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CTIFO43310 598 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CHEK2O96017 543 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 LINC00032P0C843 101 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SDC1P18827 310 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ABCD3P28288 659 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 MAGEA5P43359 124 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SERPINB4P48594 390 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 TMED10P49755 219 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 NRG3P56975 720 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 FBXW4P57775 412 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 RPL38P63173 70 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ADORA2A-AS1P86434 159 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CEP85LQ5SZL2 805 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CES4AQ5XG92 561 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 FAM9CQ8IZT9 166 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CLYBLQ8N0X4 340 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 FAM109AQ8N4B1 249 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 FAM57AQ8TBR7 257 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 AGR3Q8TD06 166 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 KAT2AQ92830 837 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ERP27Q96DN0 273 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 PKNOX2Q96KN3 472 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms