RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 GYG2O15488 501 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 CFLARO15519 480 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 TMPRSS11DO60235 418 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 PCDH7O60245 1069 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 KRT34O76011 436 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 RASAL1O95294 804 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 F10P00742 488 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 ANXA4P09525 319 aaPredicted RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 SDC1P18827 310 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 HPCAL1P37235 193 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 STT3AP46977 705 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 MLF1P58340 268 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 TRA2BP62995 288 aaKnown RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 IGLV3-21P80748 117 aaPredicted RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 MXRA7P84157 204 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 PLIN5Q00G26 463 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 ZNF763Q0D2J5 394 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 ART3Q13508 389 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 ZNF766Q5HY98 468 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 CCNYL2Q5T2Q4 361 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 C18orf63Q68DL7 685 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 OR52E8Q6IFG1 317 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 C16orf89Q6UX73 402 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 COMMD6Q7Z4G1 85 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 R3HCC1LQ7Z5L2 792 aaKnown RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 TMEM178AQ8NBL3 297 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 FAR1Q8WVX9 515 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
CLK3-218ENST00000566926 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 POLEQ07864 2286 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 EML6Q6ZMW3 1958 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 CCDC154A6NI56 674 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 NR5A2O00482 541 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 FGF17O60258 216 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 GPR75O95800 540 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 KLK1P06870 262 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 GNLYP22749 145 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 CD96P40200 585 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 CYB561P49447 251 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 GPR143P51810 404 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 MAPK12P53778 367 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 UFM1P61960 85 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 FOLH1Q04609 750 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 SRSF11Q05519 484 aaKnown RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 PTGR1Q14914 329 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 OR1C1Q15619 314 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 HSDL2Q6YN16 418 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 FUNDC1Q8IVP5 155 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 ST13P4Q8IZP2 240 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 NATD1Q8N6N6 113 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 AMER2Q8N7J2 671 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 OR5L2Q8NGL0 311 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 GRHL3Q8TE85 626 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 PTPMT1Q8WUK0 201 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 TMEM125Q96AQ2 219 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 SLC7A6OSQ96CW6 309 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 MTERF3Q96E29 417 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 ZNF764Q96H86 408 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 NPAS2Q99743 824 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 RMND5AQ9H871 391 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 MYNNQ9NPC7 610 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 LRFN1Q9P244 771 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 LEF1Q9UJU2 399 aaPredicted RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 PSME2Q9UL46 239 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 DLGAP4Q9Y2H0 992 aa12.48□□□□□ -0.41
CLK3-218ENST00000566926 YARS2Q9Y2Z4 477 aaKnown RBP12.48□□□□□ -0.41
CLK3-218ENST00000566926 A0A1W2PR48 441 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 C1orf226A1L170 272 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 OR10H2O60403 315 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 AIFM1O95831 613 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 GBAP04062 536 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 EDN3P14138 238 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 GALNSP34059 522 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 TRHRP34981 398 aaPredicted RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 NUDT2P50583 147 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 HLCSP50747 726 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 ID2Q02363 134 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 GK5Q6ZS86 529 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms