RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ELMOD1Q8N336 334 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TRIML2Q8N7C3 387 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SYT14Q8NB59 555 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 OR13C3Q8NGS6 347 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 LRRC15Q8TF66 581 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PHLDA1Q8WV24 401 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 TCP11Q8WWU5 503 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PIGCQ92535 297 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PIK3R3Q92569 461 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 P3H4Q92791 437 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ABTB1Q969K4 478 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 TMIGD2Q96BF3 282 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF707Q96C28 371 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 C19orf60Q96EN9 201 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SH3YL1Q96HL8 342 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 PANX2Q96RD6 677 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SIGLEC11Q96RL6 698 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 OMDQ99983 421 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 GAL3ST1Q99999 423 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 TUBA1CQ9BQE3 449 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CENPKQ9BS16 269 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ERVK-6Q9BXR3 956 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 STRADBQ9C0K7 418 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 BLZF1Q9H2G9 400 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 CXXC4Q9H2H0 198 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF701Q9NV72 531 aaPredicted RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 MIS18AQ9NYP9 233 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PTTG3PQ9NZH4 202 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 FLRT3Q9NZU0 649 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PIPOXQ9P0Z9 390 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 POMT2Q9UKY4 750 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC7A7Q9UM01 511 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 MEMO1Q9Y316 297 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC6A5Q9Y345 797 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 INSL5Q9Y5Q6 135 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 PPRC1Q5VV67 1664 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 RIMS1Q86UR5 1692 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 MYH14Q7Z406 1995 aaKnown RBP3□□□□□ -1.93
HERPUD1-211ENST00000566550 STRCQ7RTU9 1775 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 ZMYM2Q9UBW7 1377 aa3□□□□□ -1.93
HERPUD1-211ENST00000566550 URB2Q14146 1524 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 LOC100506127A0A0U1RQW1 187 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 A0A1B0GVT2 93 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TTC26A0AVF1 554 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 C5orf60A6NFR6 353 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MANSC4A6NHS7 340 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SNTNA6NMZ2 147 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MID1O15344 667 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 STX7O15400 261 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 RRP8O43159 456 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TLX3O43711 291 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TRIM3O75382 744 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CLDN14O95500 239 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NDUFB10O96000 172 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 GSTA1P08263 222 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ALOX5P09917 674 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 UQCRBP14927 111 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PTNP21246 168 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NT5EP21589 574 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CA4P22748 312 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CPN2P22792 545 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 UCP1P25874 307 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CHMLP26374 656 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ANXA13P27216 316 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CD38P28907 300 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CD1BP29016 333 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 AHRP35869 848 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CCT3P49368 545 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CSNK1EP49674 416 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CRYBB1P53674 252 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PLA2G16P53816 162 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CDH4P55283 916 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CLDN8P56748 225 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 B3GALT5-AS1P59052 145 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NOP14P78316 857 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NAAAQ02083 359 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CSTF1Q05048 431 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC20A2Q08357 652 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TRDNQ13061 729 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TRAF3Q13114 568 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PPIL2Q13356 520 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MTX1Q13505 466 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 KLF5Q13887 457 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 GTF2H2Q13888 395 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PTGR1Q14914 329 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SYPL1Q16563 259 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 Q3ZCU0 254 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 XKR7Q5GH72 579 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 METTL11BQ5VVY1 283 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 RAET1LQ5VY80 246 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 FCRLBQ6BAA4 426 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 DMKNQ6E0U4 476 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 STEAP1BQ6NZ63 245 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 GTF2H2CQ6P1K8 395 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF782Q6ZMW2 699 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF66Q6ZN08 573 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 KCTD8Q6ZWB6 473 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 RFPL4BQ6ZWI9 263 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 Q71RC1 249 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms