RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
SPG7-213ENST00000566221 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
SPG7-213ENST00000566221 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
SPG7-213ENST00000566221 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 EFSO43281 561 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 EMC8O43402 210 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 PRAMEF2O60811 474 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 COQ9O75208 318 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 ERN1O75460 977 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 NPPAP01160 153 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 IGKV3-11P04433 115 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 ZCCHC18P0CG32 403 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 PRKAR1AP10644 381 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 WT1P19544 449 aaPredicted RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 UQCRC2P22695 453 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 SOX18P35713 384 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 CDKN2CP42773 168 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 AP2B1P63010 937 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 GAB1Q13480 694 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 NFYCQ13952 458 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 TRMT5Q32P41 509 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 TRMT12Q53H54 448 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 LRIF1Q5T3J3 769 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 PLAG1Q6DJT9 500 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 C19orf48Q6RUI8 117 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 RNF111Q6ZNA4 994 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 RETREG3Q86VR2 466 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 NFAM1Q8NET5 270 aaPredicted RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 OR1N1Q8NGS0 311 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 ZNF721Q8TF20 911 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 NCLNQ969V3 563 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 FAM120BQ96EK7 910 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 VMP1Q96GC9 406 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 IMMP1LQ96LU5 166 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 MS4A4EQ96PG1 132 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 EFCAB1Q9HAE3 211 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 ZNF160Q9HCG1 818 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 ZCCHC3Q9NUD5 404 aaKnown RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 NTMQ9P121 344 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 C19orf53Q9UNZ5 99 aaPredicted RBP13.78□□□□□ -0.2
SPG7-213ENST00000566221 RAXQ9Y2V3 346 aa13.78□□□□□ -0.2
SPG7-213ENST00000566221 GCN1Q92616 2671 aaKnown RBP13.77□□□□□ -0.2
SPG7-213ENST00000566221 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 OR6C76A6NM76 312 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 HRKO00198 91 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 UPK1AO00322 258 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 NKX2-8O15522 239 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CBX6O95503 412 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CBX7O95931 251 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 ICAM2P13598 275 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
SPG7-213ENST00000566221 S1PR1P21453 382 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 PTPN6P29350 595 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 SSTR4P31391 388 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CCT3P49368 545 aaKnown RBP13.77□□□□□ -0.21
SPG7-213ENST00000566221 RRADP55042 308 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 UCNP55089 124 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 TLE3Q04726 772 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 EXOSC7Q15024 291 aaKnown RBP13.77□□□□□ -0.21
SPG7-213ENST00000566221 BTBD16Q32M84 506 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CCDC81Q6ZN84 652 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 ZNF621Q6ZSS3 439 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 APCDD1LQ8NCL9 501 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 OR52R1Q8NGF1 315 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 M1APQ8TC57 530 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 DOK4Q8TEW6 326 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 MAGED4Q96JG8 741 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 FER1L6-AS2Q96M78 137 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 NPAS2Q99743 824 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 SLC35A5Q9BS91 424 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 TRIM4Q9C037 500 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 SEMA4CQ9C0C4 833 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 GID8Q9NWU2 228 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CELSR3Q9NYQ7 3312 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 BCAP29Q9UHQ4 241 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 POLHQ9Y253 713 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 CFL2Q9Y281 166 aa13.77□□□□□ -0.21
SPG7-213ENST00000566221 PSMG1O95456 288 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 CLPSP04118 112 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 GSNP06396 782 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 CHI3L1P36222 383 aaPredicted RBP13.76□□□□□ -0.21
SPG7-213ENST00000566221 NUDT2P50583 147 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 CLCN2P51788 898 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 GPR143P51810 404 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 SLC37A1P57057 533 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 TP53BP2Q13625 1128 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 DCAF10Q5QP82 559 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 DLEU7Q6UYE1 221 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 ZNF615Q8N8J6 731 aa13.76□□□□□ -0.21
SPG7-213ENST00000566221 TMEM102Q8N9M5 508 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms