RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 C10orf67Q8IYJ2 551 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 GALNT6Q8NCL4 622 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 MIPOL1Q8TD10 442 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 MAL2Q969L2 176 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 NSMCE2Q96MF7 247 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 OR51I1Q9H343 314 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 TMEM38AQ9H6F2 299 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 THUMPD1Q9NXG2 353 aaKnown RBP17.52■□□□□ 0.39
COMMD4-213ENST00000565834 GPN3Q9UHW5 284 aaPredicted RBP17.52■□□□□ 0.39
COMMD4-213ENST00000565834 DMXL1Q9Y485 3027 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 CEP250Q9BV73 2442 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 A0A1W2PNU3 283 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 TCRBV16S1A1N1A0A5B0 115 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 VSTM2BA6NLU5 285 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 STK17BO94768 372 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 HEXBP07686 556 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 TNNI3P19429 210 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 PCGF2P35227 344 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 EFNA3P52797 238 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 POLE2P56282 527 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 TXNL4AP83876 142 aaKnown RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 VEZF1Q14119 521 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 EXOSC7Q15024 291 aaKnown RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 ZNF630Q2M218 657 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 TMEM164Q5U3C3 297 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 CACTIN-AS1Q8N1I8 211 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 PLPP5Q8NEB5 264 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 GIMAP5Q96F15 307 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 RSRC1Q96IZ7 334 aaKnown RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 ZNF578Q96N58 590 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 YIPF4Q9BSR8 244 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 ACTRT3Q9BYD9 372 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 SOX17Q9H6I2 414 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 GORASP2Q9H8Y8 452 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 AKIRIN1Q9H9L7 192 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 ADAP2Q9NPF8 381 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 PNO1Q9NRX1 252 aaKnown RBP17.51■□□□□ 0.39
COMMD4-213ENST00000565834 SATB2Q9UPW6 733 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 PCDHGA3Q9Y5H0 932 aa17.51■□□□□ 0.39
COMMD4-213ENST00000565834 AQP12BA6NM10 295 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 C9J4A7 227 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 HMGN4O00479 90 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 ARAFP10398 606 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 TARDBPQ13148 414 aaKnown RBP eCLIP17.5■□□□□ 0.39
COMMD4-213ENST00000565834 ZNF267Q14586 743 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-213ENST00000565834 MFSD12Q6NUT3 480 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 MRPL14Q6P1L8 145 aaKnown RBP17.5■□□□□ 0.39
COMMD4-213ENST00000565834 TMPRSS12Q86WS5 348 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 AQP12AQ8IXF9 295 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 SIMC1Q8NDZ2 872 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 OR5D16Q8NGK9 328 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 RAB8BQ92930 207 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 FAM162AQ96A26 154 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 C16orf58Q96GQ5 468 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 WDR54Q9H977 334 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 ZNF639Q9UID6 485 aa17.5■□□□□ 0.39
COMMD4-213ENST00000565834 NXT1Q9UKK6 140 aaKnown RBP17.5■□□□□ 0.39
COMMD4-213ENST00000565834 TEX51A0A1B0GUA7 166 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 C17orf105B2RV13 164 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 IDSB3KWA1 339 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 C9orf172C9J069 976 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 SLC30A4O14863 429 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 DYRK3O43781 588 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 COQ9O75208 318 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 CREG1O75629 220 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 PSMG1O95456 288 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 OR12D1P0DN82 309 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 PGDP52209 483 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 MRPS22P82650 360 aaKnown RBP17.49■□□□□ 0.39
COMMD4-213ENST00000565834 CDK6Q00534 326 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 SCARB2Q14108 478 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 ELAVL1Q15717 326 aaKnown RBP17.49■□□□□ 0.39
COMMD4-213ENST00000565834 MTX3Q5HYI7 312 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 FAM199XQ6PEV8 388 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-213ENST00000565834 FAM198BQ6UWH4 519 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 TMEM151BQ8IW70 566 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 LGI4Q8N135 537 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 NFKBIDQ8NI38 313 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 FBXO30Q8TB52 745 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 SPSB2Q99619 263 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 CNPPD1Q9BV87 410 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 A4GALTQ9NPC4 353 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 PCDHGA8Q9Y5G5 932 aa17.49■□□□□ 0.39
COMMD4-213ENST00000565834 TCRBV3S1A0A5B6 114 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 TMEM247A6NEH6 219 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 A8MUA0 341 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 GFRA3O60609 400 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 CNOT3O75175 753 aaKnown RBP17.48■□□□□ 0.39
COMMD4-213ENST00000565834 FKBP6O75344 327 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 KRT36O76013 467 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 ATP6V1G2O95670 118 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 CBX7O95931 251 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 C8BP07358 591 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 S1PR1P21453 382 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 FOXL2P58012 376 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 RHDQ02161 417 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 FBXW10Q5XX13 1052 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 CDC73Q6P1J9 531 aa17.48■□□□□ 0.39
COMMD4-213ENST00000565834 C6orf15Q6UXA7 325 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms