RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SLC22A9Q8IVM8 553 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 IFT20Q8IY31 132 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 GBP7Q8N8V2 638 aaPredicted RBP13.76□□□□□ -0.21
SPG7-210ENST00000564409 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 DOK4Q8TEW6 326 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 UCN3Q969E3 161 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 LRRC46Q96FV0 321 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 RILPQ96NA2 401 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 ZNF382Q96SR6 550 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 ZNF559Q9BR84 538 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 FETUBQ9UGM5 382 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 NFU1Q9UMS0 254 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 F8P00451 2351 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 ULK1O75385 1050 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 BCAS2O75934 225 aaPredicted RBP13.75□□□□□ -0.21
SPG7-210ENST00000564409 EPPINO95925 133 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 HPNP05981 417 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 SBK3P0C264 359 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 CT62P0C5K7 136 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 DRD2P14416 443 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 GPX3P22352 226 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 ABCD3P28288 659 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 CASP3P42574 277 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 GSTM5P46439 218 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 MASP1P48740 699 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 CDH13P55290 713 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 NAA20P61599 178 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 NUP54Q7Z3B4 507 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 ULK2Q8IYT8 1036 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 CTHRC1Q96CG8 243 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 NTNG2Q96CW9 530 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 LCORQ96JN0 433 aaPredicted RBP13.75□□□□□ -0.21
SPG7-210ENST00000564409 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 UBQLN3Q9H347 655 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 FARSBQ9NSD9 589 aaKnown RBP13.75□□□□□ -0.21
SPG7-210ENST00000564409 ALKBH4Q9NXW9 302 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 TNFRSF10DQ9UBN6 386 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 PRODH2Q9UF12 536 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 ZNF639Q9UID6 485 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 POLQO75417 2590 aa13.75□□□□□ -0.21
SPG7-210ENST00000564409 TACC2O95359 2948 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 C15orf38-AP3S2A0A0A6YYH1 394 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 A0A1W2PS29 197 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 MANBAO00462 879 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 ERAL1O75616 437 aaKnown RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 PPM1BO75688 479 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 SUPT7LO94864 414 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 OR4F21O95013 312 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 ABCB1P08183 1280 aaPredicted RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 GSTA1P08263 222 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 IMPDH1P20839 514 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 DRD5P21918 477 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 ATP5F1P24539 256 aaPredicted RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 TIMP3P35625 211 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 PPICP45877 212 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 CDK9P50750 372 aaKnown RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 PKNOX1P55347 436 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 MGAT2Q10469 447 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 DUSP8Q13202 625 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 NHSL2Q5HYW2 709 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 ZNF678Q5SXM1 525 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 TEX35Q5T0J7 233 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 TIGD3Q6B0B8 471 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 SLC30A6Q6NXT4 461 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 GPRIN3Q6ZVF9 776 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 LACC1Q8IV20 430 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 KLHL29Q96CT2 875 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 NXF5Q9H1B4 397 aaKnown RBP13.74□□□□□ -0.21
SPG7-210ENST00000564409 MAT2BQ9NZL9 334 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 BCAP29Q9UHQ4 241 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 MCM8Q9UJA3 840 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 ZNF225Q9UK10 706 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 C15orf41Q9Y2V0 281 aa13.74□□□□□ -0.21
SPG7-210ENST00000564409 SPG11Q96JI7 2443 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 A0A1B0GTL3 188 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 H3BQF6 201 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 PPP6CO00743 305 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 DVL2O14641 736 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 TO15178 435 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 ABCB7O75027 752 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 TRAPPC6AO75865 159 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 HMOX2P30519 316 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 GCKP35557 465 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 FEN1P39748 380 aaKnown RBP13.73□□□□□ -0.21
SPG7-210ENST00000564409 ADH7P40394 386 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 TRPC1P48995 793 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 KRTAP10-9P60411 292 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
SPG7-210ENST00000564409 UNC50Q53HI1 259 aa13.73□□□□□ -0.21
SPG7-210ENST00000564409 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms