RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 BASP1P80723 227 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR20EP86478 221 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR20CP86479 221 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR20DP86480 221 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR20BP86481 221 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PRR20AP86496 221 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 CDK16Q00536 496 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 PLIN5Q00G26 463 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TBX2Q13207 712 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 BIKQ13323 160 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SNX1Q13596 522 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 THOC5Q13769 683 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF267Q14586 743 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TPSAB1Q15661 275 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 BCL2A1Q16548 175 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 C18orf21Q32NC0 220 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 NCMAPQ5T1S8 102 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 LIPNQ5VXI9 398 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 CYB5R2Q6BCY4 276 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC30A6Q6NXT4 461 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 SEZ6L2Q6UXD5 910 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 C12orf54Q6X4T0 127 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 P4HA3Q7Z4N8 544 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 DTX2Q86UW9 622 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 IFNEQ86WN2 208 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 VSTM4Q8IW00 320 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF615Q8N8J6 731 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 OR14L1PQ8NHC6 308 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 RDH11Q8TC12 318 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 RBM18Q96H35 190 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 KRT12Q99456 494 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 OSBPL11Q9BXB4 747 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 MS4A8Q9BY19 250 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 FRMD8P1Q9BZ68 369 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 LACRTQ9GZZ8 138 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ACTR8Q9H981 624 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 COPS7BQ9H9Q2 264 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 TAS2R13Q9NYV9 303 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 WHRNQ9P202 907 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 REXO2Q9Y3B8 237 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 RNF115Q9Y4L5 304 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 VWFP04275 2813 aa6.93□□□□□ -1.3
HERPUD1-206ENST00000563343 ARFGEF3Q5TH69 2177 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 A0A0G2JK05 382 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 A0A1W2PS29 197 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 ANKDD1BA6NHY2 528 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 UBFD1O14562 309 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 DYRK3O43781 588 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 ZIC3O60481 467 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PPM1BO75688 479 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 MBD3O95983 291 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 GNAZP19086 355 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 HIST1H1TP22492 207 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 CPN2P22792 545 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 GALNSP34059 522 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 GCKP35557 465 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 GDF5P43026 501 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 KCNC1P48547 511 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 TMED10P49755 219 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 HNRNPH2P55795 449 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 IL2P60568 153 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 RPP38P78345 283 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 FAPQ12884 760 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 SNTA1Q13424 505 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 KBTBD12Q3ZCT8 623 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF672Q499Z4 452 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 C18orf63Q68DL7 685 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 ATG4DQ86TL0 474 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 LMNTD2Q8IXW0 634 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 RFLNBQ8N5W9 214 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 C2CD4AQ8NCU7 369 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 WDR34Q96EX3 536 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PDLIM5Q96HC4 596 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 HES6Q96HZ4 224 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 LCORQ96JN0 433 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 HS6ST2Q96MM7 605 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 TBCDQ9BTW9 1192 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 ACTR6Q9GZN1 396 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PITHD1Q9GZP4 211 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 NXF5Q9H1B4 397 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 OR10A4Q9H209 315 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 RPF2Q9H7B2 306 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PLSCR4Q9NRQ2 329 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 TAS2R10Q9NYW0 307 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 FBXL2Q9UKC9 423 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 PROCRQ9UNN8 238 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 B3GALT5Q9Y2C3 310 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 MRPS18CQ9Y3D5 142 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 MAD1L1Q9Y6D9 718 aa6.92□□□□□ -1.3
HERPUD1-206ENST00000563343 A0A1W2PP18 115 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 MIF4GDA9UHW6 222 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms