RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 KHNYNO15037 678 aaKnown RBP16.89■□□□□ 0.29
COMMD4-208ENST00000563220 JRKO75564 520 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 DIRAS1O95057 198 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 FABP3P05413 133 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 ANKRD34CP0C6C1 535 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF23P17027 643 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 TNFRSF1BP20333 461 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 PPP1R8Q12972 351 aaKnown RBP16.89■□□□□ 0.29
COMMD4-208ENST00000563220 SLC13A2Q13183 592 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 CYP27C1Q4G0S4 372 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 TSEN54Q7Z6J9 526 aaKnown RBP16.89■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF595Q8IYB9 648 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 GPR135Q8IZ08 494 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 LGI4Q8N135 537 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 SLC35A4Q96G79 324 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 ACTRT3Q9BYD9 372 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 RUBCNLQ9H714 662 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 PRTFDC1Q9NRG1 225 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 VNN3Q9NY84 501 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 NDOR1Q9UHB4 597 aa16.89■□□□□ 0.29
COMMD4-208ENST00000563220 H0YJX3 145 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 GNGT2O14610 69 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PLOD3O60568 738 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 RASAL1O95294 804 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 IFNA14P01570 189 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 NR2F1P10589 423 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 XCR1P46094 333 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 DUSP7Q16829 419 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PLA2G2CQ5R387 149 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 MFSD12Q6NUT3 480 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PIWIL3Q7Z3Z3 882 aaKnown RBP16.88■□□□□ 0.29
COMMD4-208ENST00000563220 TMEM179BQ7Z7N9 219 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF675Q8TD23 568 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 ADAMTS18Q8TE60 1221 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 CTHRC1Q96CG8 243 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 TREX2Q9BQ50 279 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-208ENST00000563220 MRPS33Q9Y291 106 aaKnown RBP16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PCDHGA5Q9Y5G8 931 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 GPR179Q6PRD1 2367 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 A0A087WV62 115 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 DLGAP1O14490 977 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 EI24O14681 340 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 MFN2O95140 757 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 CHRM4P08173 479 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PPP2R1BP30154 601 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
COMMD4-208ENST00000563220 IGLV3-21P80748 117 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-208ENST00000563220 METTL25Q8N6Q8 603 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 PACRGLQ8N7B6 248 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 SLC16A11Q8NCK7 471 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 SPPL2AQ8TCT8 520 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 MVB12AQ96EY5 273 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 CCDC74BQ96LY2 380 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 MS4A4EQ96PG1 132 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 ALOXE3Q9BYJ1 711 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 FAM192AQ9GZU8 254 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 C11orf16Q9NQ32 467 aa16.88■□□□□ 0.29
COMMD4-208ENST00000563220 BLACEA4D250 179 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 TMEM247A6NEH6 219 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 CLDN4O14493 209 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 MAOAP21397 527 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 OR1E2P47887 323 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 DUSP3P51452 185 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-208ENST00000563220 STX4Q12846 297 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 IFI44LQ53G44 452 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 C6orf52Q5T4I8 152 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 CDC73Q6P1J9 531 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 DBX2Q6ZNG2 339 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 HS3ST5Q8IZT8 346 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 LZICQ8WZA0 190 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 RNF31Q96EP0 1072 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 NDC1Q9BTX1 674 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 ADAP2Q9NPF8 381 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 PADI2Q9Y2J8 665 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF451Q9Y4E5 1061 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 AP4B1Q9Y6B7 739 aa16.87■□□□□ 0.29
COMMD4-208ENST00000563220 GALR2O43603 387 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ASNA1O43681 348 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 OR10H2O60403 315 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 RECKO95980 971 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 CD247P20963 164 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 CRISP3P54108 245 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 TXNL4AP83876 142 aaKnown RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 EXOSC7Q15024 291 aaKnown RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 OTUD3Q5T2D3 398 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 OR2T5Q6IEZ7 315 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ARMC8Q8IUR7 673 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ST13P4Q8IZP2 240 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 GPR32P1Q8NGA4 272 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 OR2T29Q8NH02 315 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ADAMTS15Q8TE58 950 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ATOH1Q92858 354 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 COL21A1Q96P44 957 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 YIPF2Q9BWQ6 316 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 FANCEQ9HB96 536 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 BCL2L10Q9HD36 194 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 LANCL2Q9NS86 450 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 RAB26Q9ULW5 256 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 GPC6Q9Y625 555 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 U3KQV3 271 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms