RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PPP1R36Q96LQ0 422 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 DGAT2Q96PD7 388 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 MIEF1Q9NQG6 463 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 PNO1Q9NRX1 252 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 GIMAP4Q9NUV9 329 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 HEY2Q9UBP5 337 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 CLCA3PQ9Y6N3 262 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 ASPDHA6ND91 283 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 PRKNO60260 465 aaPredicted RBP14.52□□□□□ -0.09
USB1-208ENST00000563207 OR10H2O60403 315 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 SNRPB2P08579 225 aaKnown RBP14.52□□□□□ -0.09
USB1-208ENST00000563207 PRPS1L1P21108 318 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 TACR1P25103 407 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 MLF1P58340 268 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 C21orf58P58505 322 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 GUCY1A3Q02108 690 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 ALDH6A1Q02252 535 aaKnown RBP14.52□□□□□ -0.09
USB1-208ENST00000563207 CEBPEQ15744 281 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 SLC25A25Q6KCM7 469 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 EPGNQ6UW88 154 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 C3P1Q6ZMU1 363 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 FAM47EQ6ZV65 393 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 ACAD11Q709F0 780 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 FGD2Q7Z6J4 655 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 OR4N5Q8IXE1 308 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 LIX1Q8N485 282 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 NATD1Q8N6N6 113 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 APCDD1LQ8NCL9 501 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 MORN4Q8NDC4 146 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 B3GNT7Q8NFL0 401 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 KLHL29Q96CT2 875 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 ART5Q96L15 291 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 GPR137Q96N19 417 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 TSSK3Q96PN8 268 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 REEP4Q9H6H4 257 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 SLC35C2Q9NQQ7 365 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 UTS2RQ9UKP6 389 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 ENTPD4Q9Y227 616 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 PDZD2O15018 2839 aa14.52□□□□□ -0.09
USB1-208ENST00000563207 CSMD2Q7Z408 3487 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 ERAL1O75616 437 aaKnown RBP14.51□□□□□ -0.09
USB1-208ENST00000563207 CPMP14384 443 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 CD46P15529 392 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 TNNI3P19429 210 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 EPHA3P29320 983 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 MPIP34949 423 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 HPCAL1P37235 193 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 IRX1P78414 480 aaPredicted RBP14.51□□□□□ -0.09
USB1-208ENST00000563207 SPRED3Q2MJR0 410 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 TICAM1Q8IUC6 712 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 CDC26Q8NHZ8 85 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 PTPMT1Q8WUK0 201 aaPredicted RBP14.51□□□□□ -0.09
USB1-208ENST00000563207 RIT1Q92963 219 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 UCN3Q969E3 161 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 EGLN2Q96KS0 407 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 ZNF681Q96N22 645 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 PRPF18Q99633 342 aaKnown RBP14.51□□□□□ -0.09
USB1-208ENST00000563207 C1orf50Q9BV19 199 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 GIMAP2Q9UG22 337 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 BAIAP2L1Q9UHR4 511 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 ZNF835Q9Y2P0 537 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 PCDHGB6Q9Y5F9 930 aa14.51□□□□□ -0.09
USB1-208ENST00000563207 NCOA6Q14686 2063 aaPredicted RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 TRBV11-1A0A0K0K1C0 115 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 WASHC1A8K0Z3 465 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 C17orf105B2RV13 164 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 C19orf84I3L1E1 186 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 CDK2AP1O14519 115 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 POLR3GO15318 223 aaPredicted RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 ASNA1O43681 348 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 DIAPH2O60879 1101 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 SLC25A12O75746 678 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 SLITRK5O94991 958 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 ATP1B1P05026 303 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 CLDN8P56748 225 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 ID2Q02363 134 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 PDE7AQ13946 482 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 SLC9B1Q4ZJI4 515 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 C6orf163Q5TEZ5 329 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 MDGA2Q7Z553 956 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 MMP21Q8N119 569 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 LRRC25Q8N386 305 aaPredicted RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 CNRIP1Q96F85 164 aaPredicted RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 VMP1Q96GC9 406 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 CCDC28BQ9BUN5 200 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 WDR55Q9H6Y2 383 aaPredicted RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 RYDENQ9NUL5 291 aaKnown RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 ATAD3AQ9NVI7 634 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.5□□□□□ -0.09
USB1-208ENST00000563207 ATP6V1HQ9UI12 483 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 EXO1Q9UQ84 846 aaKnown RBP14.5□□□□□ -0.09
USB1-208ENST00000563207 EML6Q6ZMW3 1958 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 MYO9AB2RTY4 2548 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 GTF3C1Q12789 2109 aa14.5□□□□□ -0.09
USB1-208ENST00000563207 GOLGA8QA0A0J9YX86 632 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 GOLGA8OA6NCC3 632 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 TMEM200CA6NKL6 621 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 GOLGA8NF8WBI6 632 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 HNRNPRO43390 633 aaKnown RBP14.49□□□□□ -0.09
USB1-208ENST00000563207 NME2P1O60361 137 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms