RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 PCDHGA9Q9Y5G4 932 aaKnown RBP11.85□□□□□ -0.51
CDH11-204ENST00000562712 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 A8MUI8 341 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 C9JVG2 144 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 UPK1AO00322 258 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 CDK2AP1O14519 115 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 SLC22A2O15244 555 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 PRAMEF2O60811 474 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 C6orf47O95873 294 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 CBX7O95931 251 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 PTGER1P34995 402 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 GPC1P35052 558 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 EMDP50402 254 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 POLE2P56282 527 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 KCNK10P57789 538 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 HBA1P69905 142 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 LINC00303Q3SY05 128 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 CRB2Q5IJ48 1285 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 GKAP1Q5VSY0 366 aaPredicted RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 TMEM107Q6UX40 140 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 SLC29A4Q7RTT9 530 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 LGI4Q8N135 537 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 SLC5A8Q8N695 610 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 ANKS4BQ8N8V4 417 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 GOT1L1Q8NHS2 421 aaPredicted RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 NUBPLQ8TB37 319 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 BRIX1Q8TDN6 353 aaKnown RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 ZNF354BQ96LW1 612 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 CCDC115Q96NT0 180 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 LMF1Q96S06 567 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 ZNF552Q9H707 407 aaPredicted RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 RMND5AQ9H871 391 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
CDH11-204ENST00000562712 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 PRODH2Q9UF12 536 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 BCAP29Q9UHQ4 241 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 TEKT2Q9UIF3 430 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 ERVK-11Q9UQG0 969 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
CDH11-204ENST00000562712 A0A1W2PP18 115 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 TMEM200CA6NKL6 621 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 CFLARO15519 480 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 EMC8O43402 210 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 PSMG1O95456 288 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 ALPPP05187 535 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 MC3RP41968 323 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 CDK9P50750 372 aaKnown RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 MEP1AQ16819 746 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 TMEM64Q6YI46 380 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 MTDHQ86UE4 582 aaKnown RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 RPS19BP1Q86WX3 136 aaKnown RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 C9orf40Q8IXQ3 194 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 SIMC1Q8NDZ2 872 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 C16orf52Q8NHV5 167 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 TP53INP1Q96A56 240 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 VPS33AQ96AX1 596 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 MOAP1Q96BY2 351 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 SPDL1Q96EA4 605 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 WBP1Q96G27 269 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 ITCHQ96J02 903 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 SLC25A23Q9BV35 468 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 NMUR2Q9GZQ4 415 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 ANKRA2Q9H9E1 313 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 SIRT3Q9NTG7 399 aaPredicted RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 DDX18Q9NVP1 670 aaKnown RBP11.83□□□□□ -0.52
CDH11-204ENST00000562712 STMN3Q9NZ72 180 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 MYOTQ9UBF9 498 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 SNX8Q9Y5X2 465 aa11.83□□□□□ -0.52
CDH11-204ENST00000562712 C2orf92A0A1B0GVN3 265 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 FCHO1O14526 889 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 PRKNO60260 465 aaPredicted RBP11.82□□□□□ -0.52
CDH11-204ENST00000562712 COQ9O75208 318 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
CDH11-204ENST00000562712 DRD5P21918 477 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 SOX11P35716 441 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 TRPC1P48995 793 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
CDH11-204ENST00000562712 MLF1P58340 268 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 DCAF7P61962 342 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 PRR5P85299 388 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 KLF10Q13118 480 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 DUSP8Q13202 625 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 UBAP2LQ14157 1087 aaKnown RBP11.82□□□□□ -0.52
CDH11-204ENST00000562712 EBPQ15125 230 aaKnown RBP11.82□□□□□ -0.52
CDH11-204ENST00000562712 TLR1Q15399 786 aa11.82□□□□□ -0.52
CDH11-204ENST00000562712 VPS26BQ4G0F5 336 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms